DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps60 and Chmp5

DIOPT Version :9

Sequence 1:NP_001261994.1 Gene:Vps60 / 39964 FlyBaseID:FBgn0036740 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_084090.1 Gene:Chmp5 / 76959 MGIID:1924209 Length:219 Species:Mus musculus


Alignment Length:222 Identity:140/222 - (63%)
Similarity:171/222 - (77%) Gaps:3/222 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNRLFGRGKPKEPGPSLNDCIAGVDARATNIEEKISNLEAELRKYREQMSKMREGPAKNSVKQKA 65
            |||.||:.|||.|.|||.|||..||:||.:|::|||.|:|||.||::|:.|||||||||.|||||
Mouse     1 MNRFFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAKNMVKQKA 65

  Fly    66 LRVLKQKKAYEQQAESLRNQSFNMEQANYAAQSLKDTQATVAAMKDGVKQMKTEYKKINIDQIED 130
            |||||||:.||||.::|..||||||||||..||||||:.||.|||.|||:||..||::.||||||
Mouse    66 LRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKEVKIDQIED 130

  Fly   131 IQDDMADMFEQADEVQEALGRTYGMPEVDDDDLQAELDALGDEIALDDDTSYLDDVVKAPEAPSR 195
            :||.:.||.|.|:|:||||||:||.||:|:|||:|||||||||:..|:|:||||:...||..|. 
Mouse   131 LQDQLEDMMEDANEIQEALGRSYGTPELDEDDLEAELDALGDELLADEDSSYLDEAASAPAIPE- 194

  Fly   196 EPGADSIVPGKSTIETDEFGLPKIPTS 222
              |..:....|..:..||||||:||.|
Mouse   195 --GVPTDTKNKDGVLVDEFGLPQIPAS 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps60NP_001261994.1 Snf7 1..190 CDD:304451 126/188 (67%)
Chmp5NP_084090.1 Snf7 1..201 CDD:419749 130/202 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 13/19 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..219 13/33 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837940
Domainoid 1 1.000 249 1.000 Domainoid score I2118
eggNOG 1 0.900 - - E1_KOG1655
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5757
Inparanoid 1 1.050 283 1.000 Inparanoid score I2851
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53573
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003367
OrthoInspector 1 1.000 - - oto92430
orthoMCL 1 0.900 - - OOG6_102352
Panther 1 1.100 - - LDO PTHR22761
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2003
SonicParanoid 1 1.000 - - X3249
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

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