DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps60 and SPCC162.06c

DIOPT Version :9

Sequence 1:NP_001261994.1 Gene:Vps60 / 39964 FlyBaseID:FBgn0036740 Length:226 Species:Drosophila melanogaster
Sequence 2:NP_001342736.1 Gene:SPCC162.06c / 2538774 PomBaseID:SPCC162.06c Length:210 Species:Schizosaccharomyces pombe


Alignment Length:194 Identity:81/194 - (41%)
Similarity:128/194 - (65%) Gaps:7/194 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNRLFGRGKPKEPGPSLNDCIAGVDARATNIEEKISNLEAELRKYREQMSKMREGPAKNSVKQKA 65
            |:|||||..|.:|..||.|.|..:|.|:.::|.||:.|:|:|..::::::..|.||.:.::||:|
pombe     1 MHRLFGRKPPTQPTASLTDAIDSLDKRSDSVEVKIAKLDAQLSVFQQKIANTRPGPGQTALKQRA 65

  Fly    66 LRVLKQKKAYEQQAESLRNQSFNMEQANYAAQSLKDTQATVAAMKDGVKQMKTEYKKINIDQIED 130
            :.||:|||.||.|.:.|:.||||||||....:|||:|.|||..|::..:|:|::.|.::|::||.
pombe    66 MNVLRQKKIYESQLQQLQQQSFNMEQAAMTTESLKNTMATVQTMQETARQLKSQSKNVSIEKIEK 130

  Fly   131 IQDDMADMFEQADEVQEALGRTYGMPEVDDDDLQAELDALGDEIALDDDTSYLDDVVKAPEAPS 194
            :||::.|..:.|.|:.|.||:......||:::|.|||:||..|      :|:|.|...| |.||
pombe   131 LQDEIQDYMDAAGELNEVLGQNMTDINVDEEELDAELEALQQE------SSWLGDQSTA-EKPS 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps60NP_001261994.1 Snf7 1..190 CDD:304451 77/188 (41%)
SPCC162.06cNP_001342736.1 Snf7 1..>151 CDD:328813 64/149 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 141 1.000 Domainoid score I1208
eggNOG 1 0.900 - - E1_KOG1655
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5757
Inparanoid 1 1.050 155 1.000 Inparanoid score I1282
OMA 1 1.010 - - QHG53573
OrthoFinder 1 1.000 - - FOG0003367
OrthoInspector 1 1.000 - - oto100708
orthoMCL 1 0.900 - - OOG6_102352
Panther 1 1.100 - - LDO PTHR22761
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2003
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.860

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