DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Eip74EF and svh-5

DIOPT Version :9

Sequence 1:NP_001014590.1 Gene:Eip74EF / 39962 FlyBaseID:FBgn0000567 Length:883 Species:Drosophila melanogaster
Sequence 2:NP_001257261.1 Gene:svh-5 / 181627 WormBaseID:WBGene00006462 Length:493 Species:Caenorhabditis elegans


Alignment Length:207 Identity:62/207 - (29%)
Similarity:99/207 - (47%) Gaps:37/207 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   680 PHSHPHAGQHTHSTIAAAAAAAAASVVSSSSSAVAAAAMLSASAAAAATAAAAAGGSQSVIQPAT 744
            |....:|.|..:.::|::.||.    ::||.|.:.....||:....|:...:|.      |||..
 Worm   293 PQQTANAVQSLNQSLASSIAAG----LTSSLSPLGVNYQLSSRLNPASPLLSAP------IQPKL 347

  Fly   745 S-SVSYDLSYMLELGGFQQRKAK------------KPRKPKLEMGVKRRSREGSTTYLWEFLLKL 796
            | .:.|..:...|....::|.|:            ||||         ||:......||||:...
 Worm   348 SPMLKYSCTINTEYEVPEERSAESSDLKIKKNKDGKPRK---------RSQHTKGNKLWEFIRDA 403

  Fly   797 LQDREYCPRFIKWTNREKGVFKLVDSKAVSRLWGMHKNKPDMNYETMGRALRYYYQRGILAKVD- 860
            |:|...||..::|.:..:|||::|:|:.::||||..||...|.||.:.||:|.||::.||..|. 
 Worm   404 LKDPSTCPSVVRWEDPIEGVFRIVESEKLARLWGARKNNEKMTYEKLSRAMRTYYEKQILVPVPK 468

  Fly   861 ----GQRLVYQF 868
                .::|||:|
 Worm   469 TGLYPKKLVYKF 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Eip74EFNP_001014590.1 Ets 789..869 CDD:278602 35/85 (41%)
svh-5NP_001257261.1 SAM_PNT_ESE 135..203 CDD:188885
ETS 393..485 CDD:197710 35/88 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.