DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycT and CCNT2

DIOPT Version :10

Sequence 1:NP_524127.2 Gene:CycT / 39961 FlyBaseID:FBgn0025455 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_490595.1 Gene:CCNT2 / 905 HGNCID:1600 Length:730 Species:Homo sapiens


Alignment Length:1028 Identity:301/1028 - (29%)
Similarity:406/1028 - (39%) Gaps:398/1028 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 WYFSNDQLANSPSRRCGIKGDDELQYRQMTAYLIQEMGQRLQVSQLCINTAIVYMHRFYAFHSFT 109
            |:|:.:||.|:||||||::.|.||..||..|.|||||||||.||||.||||||||||||..||||
Human    11 WFFTREQLENTPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTINTAIVYMHRFYMHHSFT 75

  Fly   110 HFHRNSMASASLFLAAKVEEQPRKLEHVIRAANKCLPP------TTEQNYAELAQELVFNENVLL 168
            .|::|.::|.:||||||||||.|||||||:.|:.||.|      |....|.:..||||..|.::|
Human    76 KFNKNIISSTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQTQELVILETIML 140

  Fly   169 QTLGFDVAIDHPHTHVVRTCQLVKACKDLAQTSYFLASNSLHLTSMCLQYRPTVVACFCIYLACK 233
            |||||::.|:||||.||:..|||:|.|||||||||:|:||||||:.||||:|||:||.||:||||
Human   141 QTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACK 205

  Fly   234 WSRWEIPQSTEGKHWFYYVDKTVSLDLLKQLTDEFIAIYEKSPARLKSKLNSIKAIAQGASNRTA 298
            ||.||||.||:||||:.|||.||:|:||.:||.||:.|.||:|.||| |:.:.:|      |:.|
Human   206 WSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQILEKTPNRLK-KIRNWRA------NQAA 263

  Fly   299 NSKDKPKEDWKITEMMKGYHSNITTPPELLNGNDSRDRDRDRERERERERDPSSLLPPPAMVPQQ 363
            .   |||.|.:::|          ||  ||.                     |||:....:|   
Human   264 R---KPKVDGQVSE----------TP--LLG---------------------SSLVQNSILV--- 289

  Fly   364 RRQDGGHQRSSSVSGVPGSSSSSSSSSHKMPNYPGGMPPDAHTDHKSKQPGYNNRMPSSHQRSSS 428
                      .||:|||.:.|....|:..   :|..:|.                          
Human   290 ----------DSVTGVPTNPSFQKPSTSA---FPAPVPL-------------------------- 315

  Fly   429 SGLGSSGSGSQRSSSSSSSSSQQPGRPSMPVDYHKSSRGMPPVGVGMPPHGSHKMTSGSKPQQPQ 493
                :||:.|.:.|.:|.:.|.             .:.|||....|:..|          .:.||
Human   316 ----NSGNISVQDSHTSDNLSM-------------LATGMPSTSYGLSSH----------QEWPQ 353

  Fly   494 QQPVPHPSASNSSASGMSSKDKSQSNKMYPNAPPPYSNSAPQNPLMSRGGYPGASNGSQPPPPAG 558
            .|                  |.:::.::|                            ||      
Human   354 HQ------------------DSARTEQLY----------------------------SQ------ 366

  Fly   559 YGGHRSKSGSTVHGMPPFEQQLPYSQSQSYGHMQQQPVPQSQQQQMPPEASQHSLQSKNSLFSPE 623
                              :|:...|.||...:.||           .|..|.||           
Human   367 ------------------KQETSLSGSQYNINFQQ-----------GPSISLHS----------- 391

  Fly   624 WPDIKKEPMSQSQPQPFNGLLPPPAPPGHDYKLNSHPRDKESPKKERLTPTKKDKHRPVMPPVGS 688
                              ||...|.      |::.|     |..|:..|      |:        
Human   392 ------------------GLHHRPD------KISDH-----SSVKQEYT------HK-------- 413

  Fly   689 GNSSSGSGSSKPMLPPHKKQIPHGGDLLTNPGESGSLKRPNEISGSQYGLNKLDEIDNSNMPREK 753
                  :||||           |.|.:.|.||..     |.::|..:|              |||
Human   414 ------AGSSK-----------HHGPISTTPGII-----PQKMSLDKY--------------REK 442

  Fly   754 LRKLDTTTGLPTYPNY-----EEKHTPLNMSNGIETTPDLVRSLLKESLCPSNASLLKPDALTMP 813
             |||: |..|....:|     |::|     ..|             :|...|::|:..|..:.:|
Human   443 -RKLE-TLDLDVRDHYIAAQVEQQH-----KQG-------------QSQAASSSSVTSPIKMKIP 487

  Fly   814 GLKPPAELLEPMPAPATIKKEQGITPMTSLAS-GPAPMDLEVPTKQAGEIKEESSSKSEKKKKKD 877
            .......:.:......::|....|.|....|| ....|.::|.:.:.....:|.|.||:......
Human   488 IANTEKYMADKKEKSGSLKLRIPIPPTDKSASKEELKMKIKVSSSERHSSSDEGSGKSKHSSPHI 552

  Fly   878 KHKHKEKDKSKDKTEKEERKKHKKDKQKDRSGSGGSKDSSLPNEPLKMVIKNPNGSLQAGASAPI 942
            ...||||.| :..:.:.....||.......|.|||||.|:                         
Human   553 SRDHKEKHK-EHPSSRHHTSSHKHSHSHSGSSSGGSKHSA------------------------- 591

  Fly   943 KLKISKNKVEPNNYSAAAGLPGAIGYGLPPTTATTTSASIGAAAPVLPPYGAGGGGYSSSGGSSS 1007
                                     .|:|||.         ..:||         |.||.|.|||
Human   592 -------------------------DGIPPTV---------LRSPV---------GLSSDGISSS 613

  Fly  1008 GGSSKKK-H----SDRDRDKESKKNK--------SQDYAKYNGAGGGIFN-PL 1046
            ..||:|: |    |.....|.||.:|        |....:|..:...:|| ||
Human   614 SSSSRKRLHVNDASHNHHSKMSKSSKSSGSSSSSSSSVKQYISSHNSVFNHPL 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycTNP_524127.2 CYCLIN_CCNT_rpt1 45..174 CDD:410241 82/134 (61%)
CYCLIN_CCNT_rpt2 179..268 CDD:410242 63/88 (72%)
CCNT2NP_490595.1 Interaction with MDFIC and MDFI. /evidence=ECO:0000269|PubMed:17289077 1..300 178/344 (52%)
CYCLIN_CCNT2_rpt1 8..146 CDD:410299 82/134 (61%)
CYCLIN_CCNT2_rpt2 150..263 CDD:410301 75/119 (63%)
Interaction with POLR2A. /evidence=ECO:0000269|PubMed:15563843 250..300 25/105 (24%)
ROM1 296..>427 CDD:227709 49/338 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 341..430 37/250 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 497..652 48/223 (22%)

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