DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycT and AT5G45190

DIOPT Version :9

Sequence 1:NP_001261992.1 Gene:CycT / 39961 FlyBaseID:FBgn0025455 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_001154763.1 Gene:AT5G45190 / 834555 AraportID:AT5G45190 Length:590 Species:Arabidopsis thaliana


Alignment Length:610 Identity:148/610 - (24%)
Similarity:252/610 - (41%) Gaps:107/610 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SASGIPITANNNLPFEKDK---IWYFSNDQL-ANSPSRRCGIKGDDELQYRQMTAYLIQEMGQRL 85
            |.||:...:.|:  .||.:   .|||...:: .|||||..||....|...|:.....:|::|.||
plant    12 SESGVSSHSRNS--HEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRL 74

  Fly    86 Q-------VSQLC----INTAIVYMHRFYAFHSFTHFHRNSMASASLFLAAKVEEQPRKLEHVI- 138
            :       ::.:|    |.|||::.|||:...|.....|.::|:..:|||.||||.||.|:.|| 
plant    75 KLAWFLDIIAYVCTDVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIF 139

  Fly   139 ---RAANKCLPPTT----EQNYAELAQELVFN-ENVLLQTLGFDVAIDHPHTHVVRTCQLVKACK 195
               ...||..|..:    ::...|..:||:.| |.::|.|||||:.:.||:..:|...:..|..:
plant   140 VSYEIINKKDPGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQ 204

  Fly   196 D-LAQTSYFLASNSLHLTSMCLQYRPTVVACFCIYLACKWSRWEIPQSTEGKHWFYYVDKTVSLD 259
            : |||.::...::.|. ||:|||::|..:|...|:||.|:.:.::|...| |.|:...|  |:..
plant   205 NALAQVAWNFVNDGLR-TSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGE-KVWWQEFD--VTPR 265

  Fly   260 LLKQLTDEFIAIYEKS--PARLKSKLNSIKAIAQGASNRTANSKDKPKEDWKI----TEMMKGYH 318
            .|:.::::.:.:||::  ||   |:.:.:::...|.|.:...|::....|..:    |..::..|
plant   266 QLEDVSNQMLELYEQNRVPA---SQGSEVESSVGGGSAQRPGSRNAVSTDEHVGSRQTSSVRSTH 327

  Fly   319 SNITTPPE------LLN------GNDSRDRDRDRERERERERDPSSLLPPPAMVPQQRRQDGGHQ 371
            ....:...      :||      |.::.:...|.:.|.|||...|||........:...::..|.
plant   328 EQSNSDNHGGSSKGVLNQNNENGGGEAANVSVDNKEEIERETKESSLHLESHPAHKDNVREAPHN 392

  Fly   372 RSSSVSGVPGSSSSSSSSSHKMPNYPGGMPPDAHTDHKSKQPGYNNRMPSSHQRSSSSGLGSSGS 436
            ....|.| ||..:|...         ||...|....|||:.....:.:.|  |......|.....
plant   393 SRPLVEG-PGKDNSERE---------GGELQDDGAVHKSRNVDVGDALIS--QSPKDLKLLRDKV 445

  Fly   437 GSQRSSSSSSSSSQQPGRPSMPVDYHKSSRGMPPVGVGMPPHGSHKMTSGSKPQQPQQQPVPHPS 501
            .::|..:......:...:..|..| ....|.:..|.:.:    ..:.|...|.|.       .|.
plant   446 KAKREKAKKLLGERTRKKDLMDED-DLIERELEDVQLAV----EDEKTKERKVQS-------RPK 498

  Fly   502 ASNSSASGMSSKD---------KSQSNKMYPNAPPPYSNSAPQNPLMSRGGYP----------GA 547
            |.||...|....:         .::..:|..|...|..:|..:    ..|..|          .:
plant   499 AENSDLMGTEHGEILDVKGEVKNTEEGEMVNNNVSPMMHSRKR----KMGSPPEKQSEGKRRHNS 559

  Fly   548 SNGSQPPPPAGYGGHRSKSGSTVHG 572
            .||.:        .|::..||:.||
plant   560 ENGEE--------SHKTSRGSSHHG 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycTNP_001261992.1 Cyclin_N 42..176 CDD:278560 53/157 (34%)
CYCLIN <203..>251 CDD:214641 16/47 (34%)
AT5G45190NP_001154763.1 Cyclin_N 33..185 CDD:278560 53/151 (35%)
CYCLIN 193..279 CDD:214641 24/89 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 80 1.000 Domainoid score I2988
eggNOG 1 0.900 - - E1_COG5333
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10026
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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