DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycT and ccnk

DIOPT Version :9

Sequence 1:NP_001261992.1 Gene:CycT / 39961 FlyBaseID:FBgn0025455 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_001072323.1 Gene:ccnk / 779776 XenbaseID:XB-GENE-478709 Length:571 Species:Xenopus tropicalis


Alignment Length:702 Identity:171/702 - (24%)
Similarity:272/702 - (38%) Gaps:172/702 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PITANNNLPFEKDKIWYFSNDQLANSPSRRCGIKGDDELQYRQMTAYLIQEMGQRLQVSQLCINT 94
            |.||..:|...| ..||:....||::||:..|:....|.:||:..|..|.::|.||.:....:.|
 Frog    10 PSTAPASLDHAK-PCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLAT 73

  Fly    95 AIVYMHRFYAFHSFTHFHRNSMASASLFLAAKVEEQPRKLEHVIRAANKCLPPTTEQNYAELA-- 157
            .|:|.||||.||||..|.|....:..||||.||||.|:|.:.:|:.|...|   .:..:.:..  
 Frog    74 GIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLL---NDVQFGQFGDD 135

  Fly   158 --QELVFNENVLLQTLGFDVAIDHPHTHVVRTCQLVKACKD----LAQTSYFLASNSLHLTSMCL 216
              :|::..|.:||||:.||:.::||:..::|..:.:|..|:    |.|.::...::|| .|::.|
 Frog   136 PKEEVMVLERILLQTIKFDLQVEHPYQFLLRYAKQLKGDKNKIQKLVQMAWTFVNDSL-CTTLSL 199

  Fly   217 QYRPTVVACFCIYLACKWSRWEIPQSTEG---KHWFYYVDKTVSLDLLKQLTDEFIAIYEKSPAR 278
            |:.|.::|...:|||.:..::||.:.|..   :.|:....:.|.:|:|:.:..:.:.:|.:...:
 Frog   200 QWEPEIIAVAVMYLAGRLCKFEIQEWTSKPLYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQ 264

  Fly   279 LK---SKLNSIKAIAQGASNRTANSKDKPKEDWKITEMMKGYHSNITTPPELLNGNDSRDRDRDR 340
            :.   :...|.:..||.||               :....:..::::.|.|:          ...:
 Frog   265 MPHHGAPQTSPQVQAQIAS---------------VQPQQQTQNADLQTAPQ----------KEQQ 304

  Fly   341 ERERERERDPSSLLPPPAMVPQQRRQDGGHQRSSSVSGVPGSSSSSSSSSHKMPNYPGGMPPDAH 405
            :...::.:.||....||.  |.:|......:..|.|...|....|....||  |..|..:||   
 Frog   305 QTTSQQPKKPSPQSSPPK--PVKRPLPTSPKDDSKVIEQPLPKLSKIEISH--PPLPPVLPP--- 362

  Fly   406 TDHKSKQPGYNNRMPSSHQRSSSSGLGSSGSGSQRSSSSSSSSSQQPGRPSMPVDYHKSSRGMPP 470
            .:.|...|                              |.:.|...|.....|.::.|..  :||
 Frog   363 PERKPLVP------------------------------SIAVSEGDPAVALEPAEHTKIQ--IPP 395

  Fly   471 VGVGMPPHGSHKMTSGSKPQQPQQQPVPH---PSASNSSASGMSSKDKSQSNKMYPNAPPPYSNS 532
            .....|.|              |..|:||   |....|..:|||:.:...|.:.|.:        
 Frog   396 PAHPAPVH--------------QPPPIPHRPPPPPPASYITGMSTTNSYMSGEGYQS-------- 438

  Fly   533 APQNPLMSRGGYPGASNGSQPPPPAGYGGHRSKSGSTVHGMPPFEQQLPYSQSQSYGHMQQQPVP 597
                 |.|.....|.:.||.||.   ||             ||  ..|||     :.|:.....|
 Frog   439 -----LQSMMKTEGPTYGSLPPT---YG-------------PP--AHLPY-----HPHVFPPNPP 475

  Fly   598 QSQQQQMPPEASQHSLQSKNSLFSPEWPDIKKEPMSQSQPQPFNGLLPPP-APPGHDYKLNSHPR 661
            .:.....||           |.|.|  |:|.........|..:|...||| .||.|  .:.||| 
 Frog   476 PTVPPPPPP-----------SSFPP--PNIPPPTPVYPPPPAYNPNFPPPRLPPTH--TVPSHP- 524

  Fly   662 DKESPKKERLTPTKKDKHRPVMPPVGSGNSSSGSGSSKPMLPPHKKQIPHGG 713
                |....:.||....  |.:||          |...|::||   .||..|
 Frog   525 ----PPGIAMPPTSYPP--PAVPP----------GGQPPVVPP---PIPPPG 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycTNP_001261992.1 Cyclin_N 42..176 CDD:278560 49/137 (36%)
CYCLIN <203..>251 CDD:214641 14/50 (28%)
ccnkNP_001072323.1 CCL1 25..>217 CDD:227640 65/195 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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