DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycT and Ccnt2

DIOPT Version :9

Sequence 1:NP_001261992.1 Gene:CycT / 39961 FlyBaseID:FBgn0025455 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_082675.1 Gene:Ccnt2 / 72949 MGIID:1920199 Length:723 Species:Mus musculus


Alignment Length:722 Identity:256/722 - (35%)
Similarity:348/722 - (48%) Gaps:140/722 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 WYFSNDQLANSPSRRCGIKGDDELQYRQMTAYLIQEMGQRLQVSQLCINTAIVYMHRFYAFHSFT 109
            |:|:.:||.|:||||||::.|:||.:||..|.|||:|||||.||||.||||||||||||..||||
Mouse    11 WFFTREQLENTPSRRCGVEADEELSHRQQAANLIQDMGQRLNVSQLTINTAIVYMHRFYMHHSFT 75

  Fly   110 HFHRNSMASASLFLAAKVEEQPRKLEHVIRAANKCLPP------TTEQNYAELAQELVFNENVLL 168
            .|:||.::..:||||||||||.|||||||:.|:.||.|      |....|.:..||||..|.::|
Mouse    76 KFNRNIISPTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQTQELVLLETIML 140

  Fly   169 QTLGFDVAIDHPHTHVVRTCQLVKACKDLAQTSYFLASNSLHLTSMCLQYRPTVVACFCIYLACK 233
            |||||::.|:||||.||:..|||:|.|||||||||:|:||||||:.||||:|||:||.||:||||
Mouse   141 QTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACK 205

  Fly   234 WSRWEIPQSTEGKHWFYYVDKTVSLDLLKQLTDEFIAIYEKSPARLKSKLNSIKAIAQGASNRTA 298
            ||.||||.||:||||:.|||.||:|:||.:||.||:.|.||:|:||| ::.:.:|:|:       
Mouse   206 WSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQILEKTPSRLK-RIRNWRAMAK------- 262

  Fly   299 NSKDKPKEDWKITEMMKGYHSNITTP---PELLNGNDSRDRDRDRERERERERDPSSLLPPP--- 357
                |||.|.:::|          ||   ..|:..:...|...........::..:|..|.|   
Mouse   263 ----KPKVDGQVSE----------TPLLGSSLVQNSILVDSVTGVPANPSFQKPSTSTFPAPIPL 313

  Fly   358 ----AMVPQQRRQDGGHQRSSSVSGVPGSSSSSSSSSHKMPNYPGGMPPDAHTDHKSKQPGYNNR 418
                ..|...|..|   ..|...:|:| |:|.|.||..:.|.:    |..|.||     |.|..:
Mouse   314 NSGSTSVQDSRASD---NLSVLAAGMP-STSYSLSSHQEWPQH----PDSARTD-----PVYTQK 365

  Fly   419 MPS--------SHQRSSSSGLGSS-----------GSGSQRSSSSSSSSSQQ---PGRP-----S 456
            ..:        |.|:..|..|.|.           .|..|..:..:.||...   |..|     .
Mouse   366 QEATLSGSQYISFQQGPSMALHSGLHHRPDKVADHSSAKQEYTHKAGSSKHHGPIPATPGMLPQK 430

  Fly   457 MPVDYHKSSRGMPPVGVG------------MPPHGSHKMTSGSKPQQPQQQPVPHPSASNSSASG 509
            |.:|.::..|.:..:.|.            ...||..:..:|:....|.:..:|..::.......
Mouse   431 MSLDKYREKRKLETLDVDTRDHYLAAHAEQQHKHGPAQAVTGTSVTSPIKMKLPLTNSDRPEKHV 495

  Fly   510 MSSKDKSQSNKMYPNAPPPYSNSAPQNPLM-----------SRGGYPGASNGSQP---------- 553
            ...|::|.|.|:....|||....:.:...|           |.....|.|..|.|          
Mouse   496 AEKKERSGSLKLRIPIPPPDKGPSKEELKMKIKVASSERHSSSDEGSGKSKHSSPHISRDHKEKH 560

  Fly   554 ---PPPAGYGGHR---SKSGSTVH---GMPPFEQQLPYSQSQSYGHMQQQPVPQSQQQQMPPEAS 609
               |....:..|:   ..||.:.|   ||||...:.|.    ..|.........::::....|||
Mouse   561 KEHPANRHHSSHKYLHMHSGGSKHTADGMPPTVLRSPV----GLGPEGVSSASSARKKLHSSEAS 621

  Fly   610 --QHSLQSKNSL---FSPEWPDIKKEPMSQSQPQPFNGLLPPPAPP------GH---DYKLNSHP 660
              .||..||:|.   .|.....:|:...|.|  ..||..||||.|.      ||   ..||:..|
Mouse   622 HNHHSKMSKSSKSAGSSSSSSSVKQYLSSHS--SVFNHPLPPPPPVTYQVGYGHLSTLVKLDKKP 684

  Fly   661 RDKESPK 667
            .:...|:
Mouse   685 VEPHGPE 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycTNP_001261992.1 Cyclin_N 42..176 CDD:278560 82/136 (60%)
CYCLIN <203..>251 CDD:214641 35/47 (74%)
Ccnt2NP_082675.1 Interaction with MDFIC and MDFI. /evidence=ECO:0000250|UniProtKB:O60583 1..298 166/308 (54%)
CCL1 8..>216 CDD:227640 131/204 (64%)
CYCLIN 36..108 CDD:238003 51/71 (72%)
Interaction with POLR2A. /evidence=ECO:0000250|UniProtKB:O60583 250..298 14/69 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..325 4/27 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..364 11/32 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..428 8/42 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 458..645 38/190 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839916
Domainoid 1 1.000 178 1.000 Domainoid score I3541
eggNOG 1 0.900 - - E1_COG5333
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 340 1.000 Inparanoid score I2346
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002290
OrthoInspector 1 1.000 - - otm42963
orthoMCL 1 0.900 - - OOG6_105617
Panther 1 1.100 - - LDO PTHR10026
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4505
SonicParanoid 1 1.000 - - X2329
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.780

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