DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycT and ccnk

DIOPT Version :9

Sequence 1:NP_001261992.1 Gene:CycT / 39961 FlyBaseID:FBgn0025455 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_001157251.1 Gene:ccnk / 569432 ZFINID:ZDB-GENE-030131-5126 Length:539 Species:Danio rerio


Alignment Length:714 Identity:166/714 - (23%)
Similarity:260/714 - (36%) Gaps:225/714 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 WYFSNDQLANSPSRRCGIKGDDELQYRQMTAYLIQEMGQRLQVSQLCINTAIVYMHRFYAFHSFT 109
            ||:....||::|| :..:....|.:||:..|..|.::|.||.:....:.|.|.|.||||.||||.
Zfish    26 WYWDKKDLAHTPS-QSDLDPATEARYRREGARFIFDVGTRLGLHYDTLATGITYFHRFYMFHSFK 89

  Fly   110 HFHRNSMASASLFLAAKVEEQPRKLEHVIRAANKCLPPTTEQNYAELA----QELVFNENVLLQT 170
            .|.|....:..||||.||||.|:|.:.:|:.|...|   .:..:|:..    :|::..|.:||||
Zfish    90 QFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLL---NDVQFAQFGDDPKEEVMVLERILLQT 151

  Fly   171 LGFDVAIDHPHTHVVRTCQLVKACKD----LAQTSYFLASNSLHLTSMCLQYRPTVVACFCIYLA 231
            :.||:.::||:..::|..:.:|..|:    |.|.::...::|| .|.:.||:.|.::|...:|||
Zfish   152 IKFDLQVEHPYQFLLRYAKQLKGDKNKVQKLVQMAWTFVNDSL-CTMLSLQWEPEIIAVAVMYLA 215

  Fly   232 ---CKW--SRWEIPQSTEGKHWFYYVDKTVSLDLLKQLTDEFIAIYE--KSPARLKSKLNSIKAI 289
               ||:  ..|...||:  :.|:....:.|.::||:.:..:.:.:|.  |.|...:..:      
Zfish   216 GRLCKFDIQEWTSKQSS--RRWWEQFVQDVPVELLEDICHQILDLYSQGKQPIPQQPPM------ 272

  Fly   290 AQGASNRTANSKDKPKEDWKITEMMKGYHSNITTPPELLNGNDSRDRDRDRERERERERDPSSLL 354
                     ..|:||...........|..:....||...|                     |...
Zfish   273 ---------QDKEKPPPPPAAPPGQSGAQNPPAQPPSKKN---------------------SPQA 307

  Fly   355 PPPAMVPQQRRQDGGHQRSSSVSGVPGSSSSSSSSSHKMPNYPGGMPPDAHTDHKSKQPGYNNRM 419
            .|||.:.:|      |.........|.....|     |:|.....|||                :
Zfish   308 SPPAKIKRQ------HVSPKDEPKAPAEQVGS-----KIPRLESPMPP----------------L 345

  Fly   420 PSSH--QRSSSSGLGSSGSGSQRSSSSSSSSSQQPGRPSMPVDYHKSSRGMPPVGVGMPPHGSHK 482
            |.|.  :|.:.|.:.:..:.::.:::|....:|.|.               ||:     ||    
Zfish   346 PVSQPPERKTPSAIPAPPAEAEPAAASELDPAQGPA---------------PPL-----PH---- 386

  Fly   483 MTSGSKPQQPQQQPVPHPSA----SNSSASGMSSKDKSQSNKMYPNAPPPYSNSAPQNPLMSRGG 543
               |:.|..|.:.|.|.||:    .::|:|.||.:.......|.....|.|   ||..|......
Zfish   387 ---GAPPPLPHRPPPPPPSSYIMGMSTSSSYMSGEGFQSLQSMMKTEGPSY---APMPPSYRMAY 445

  Fly   544 YPGASNGSQPPPPAGYGGHRSKSGSTVHGMPPFEQQLPYSQSQSYGHMQQQPVPQSQQQQMPPEA 608
            :|.....:.||||               |.||         ..||      |.|     .:||. 
Zfish   446 HPHVYAHTNPPPP---------------GPPP---------PASY------PPP-----NLPPP- 474

  Fly   609 SQHSLQSKNSLFSPEWPDIKKEPMSQSQPQPFNGLLPPPAPPGHDYKLNSHPRDKESPKKERLTP 673
                        :|.:|.....|   |.|.|     ||..||||:                    
Zfish   475 ------------TPAYPPPGYNP---SYPPP-----PPHMPPGHN-------------------- 499

  Fly   674 TKKDKHRPVMPPVGSGNSSSGSGSSKPMLPPHKKQIPHGGDLLTNPGESGSLKRPNEISGSQYG 737
                     :||.|.|  ...:|...|.:||.:.|:|                 |:.|:|...|
Zfish   500 ---------VPPPGMG--LPPAGYPPPPVPPGQPQLP-----------------PHAITGMNRG 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycTNP_001261992.1 Cyclin_N 42..176 CDD:278560 49/134 (37%)
CYCLIN <203..>251 CDD:214641 16/52 (31%)
ccnkNP_001157251.1 CYCLIN 51..149 CDD:238003 35/100 (35%)
CYCLIN 160..259 CDD:238003 26/101 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5333
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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