Protein Alignment CycT and ccnl1a

DIOPT Version :9

• Sequence 1: NP_001261992.1
• Gene: CycT / 39961
• FlyBaseID: FBgn0025455
• Length: 1097
• Species: Drosophila melanogaster
• Sequence 2: NP_001082832.1
• Gene: ccnl1a / 553269
• ZFINID: ZDB-GENE-050419-206
• Length: 534
• Species: Danio rerio
• Alignment Length: 572
• Identity: 144/572 - (25%)
• Similarity: 227/572 - (39%)
• Gaps: 124/572 - (21%)

  Fly     9 PQAATASSSSSASAAASA--SGIPITANNNL-PFEKDKIWYFSNDQLANSPSRRCGIKGDDELQY 70
            |.|.|.:::|........  |.:.:|.:|:| |.||          |:.:||.:.|:....|...
Zfish    11 PAANTPANNSEGILIGDKVYSEVFLTIDNSLIPEEK----------LSPTPSMQDGLDLYTETDL 65

  Fly    71 RQMTAYLIQEMGQRLQVSQLCINTAIVYMHRFYAFHSFTHFHRNSMASASLFLAAKVEEQPRKLE 135
            |.:...|||..|..|::.|:.:.|..|..|||:...||.......:|.|.:.||:|:||.||::.
Zfish    66 RILGCELIQSAGILLRLPQVAMATGQVLFHRFFYSKSFVKHSFEIVAMACVNLASKIEEAPRRIR 130

  Fly   136 HVI---------RAANKCLPPTTEQNYAELAQELVFNENVLLQTLGFDVAIDHPHTHVVRTCQLV 191
            .||         |......|...:|||.....:::..|..:|:.|||.|.:.|||..:|...|::
Zfish   131 DVINVFHHLRQLRGKRSPSPLILDQNYINTKNQVIKAERRILKELGFCVHVKHPHKIIVMYLQVL 195

  Fly   192 KACKD--LAQTSYFLASNSLHLTSMCLQYRPTVVACFCIYLACKWSRWEIPQSTEGKHWF----- 249
            :..|:  |.||::...::||. |::.::::...:||.|||||.:..:..:|..   ..|:
Zfish   196 ECEKNQTLVQTAWNYMNDSLR-TNVFVRFQAETIACACIYLAARVLQISLPSR---PIWYLLFGA 256

  Fly   250 --------------YYVDKTVSLDLL-KQLTDEFIAIYEK---------------------SPAR 278
                          .|..:..:.||| |::....:||.:.                     |||.
Zfish   257 TEEEIKDICTTTLKLYTRRKPNYDLLEKEVDKRKMAIQDAKLKAKGLNPDGTPAICSFGGFSPAS 321

  Fly   279 LKSKLNSIKAIAQGASNRTANSKDKPKEDWKITEMMKGYHSNITTPPELLNGNDSRDRDRDRERE 343
            ..|..|.:|...:..:.:|..:..|..||  ..:..|..|:.:....:|...:.|..|.|.|.|.
Zfish   322 KPSSPNIMKTDEKSPNLQTLKAMKKEPED--RPQGSKSPHNGLRKDSKLGRNSRSASRSRSRTRS 384

  Fly   344 RERERDPSSLLPPPAMVPQQRRQDGGHQRSSSVSGVPGS-SSSSSSSSHKMPNYPGGMPPDAHTD 407
            |.|.|.|              |:...::||.|     |: ||.|.|.||..     .:.|..||:
Zfish   385 RTRSRSP--------------RRHYNNRRSHS-----GTYSSRSRSRSHSR-----SLSPRRHTN 425

  Fly   408 HKSKQPGYNNRMP--SSHQRSSSSGLGSSGSGSQRSSSSSSSSSQQPGRPSMPVD---------- 460
            |....|    .:|  .|.|||......|..|..::.|.|.|.|:.:|.......|
Zfish   426 HGPPSP----LLPHLKSKQRSDDLHQHSRHSHKRKRSRSRSRSTSKPRERDRERDRERERDRSSS 486

  Fly   461 ----YHKSSRGMPPVGVGMPPHGSHKMTSGSKPQQPQQQPVPHPSASNSSAS 508
                .||..|..     |...|...:..|.|..:..:.:   |.|:|:||.|
Zfish   487 DLAKKHKHERSS-----GSGHHRDRRERSRSYERSHKSK---HHSSSHSSHS 530

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycT	NP_001261992.1	Cyclin_N	42..176	CDD:278560	40/142 (28%)
		CYCLIN	<203..>251	CDD:214641	12/66 (18%)
ccnl1a	NP_001082832.1	CYCLIN	65..137	CDD:238003	25/71 (35%)
		CYCLIN	188..264	CDD:214641	18/79 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170584010
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5333
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.740