DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycT and ccnc

DIOPT Version :10

Sequence 1:NP_524127.2 Gene:CycT / 39961 FlyBaseID:FBgn0025455 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_989157.2 Gene:ccnc / 394762 XenbaseID:XB-GENE-922006 Length:283 Species:Xenopus tropicalis


Alignment Length:250 Identity:64/250 - (25%)
Similarity:111/250 - (44%) Gaps:43/250 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 WYFSNDQLANSPSRRCGIKGDDELQYRQMTAY---LIQEMGQRLQVSQLCINTAIVYMHRFYAFH 106
            |......|..  .|:..:|...|.:|.::..:   :||.:|:.|::.|..|.||.||..||||.:
 Frog    14 WILDKQDLLK--ERQKDLKFLSEEEYWKLQIFFTNVIQALGEHLKLRQQVIATATVYFKRFYARY 76

  Fly   107 SFTHFHRNSMASASLFLAAKVEE-----QPRKLEHVIRAANKCLPPTTEQNYAELAQELVFNEN- 165
            |........||...:|||:||||     ..|    :|.||...|  .|..:|| ..:|..:..| 
 Frog    77 SLKSIDPVLMAPTCVFLASKVEEFGVVSNTR----LISAATSVL--KTRFSYA-FPKEFPYRMNH 134

  Fly   166 ------VLLQTLGFDVAIDHPHTHVVRTCQLVKACKDLAQTSYFL-----ASNSLHLTSMCLQYR 219
                  .||:.:...:.:.||:.      .|::..:|:.|....|     ..|..:.|.:||.|.
 Frog   135 ILECEFYLLELMDCCLIVYHPYR------PLLQYVQDMGQEDMLLPLAWRIVNDTYRTDLCLLYP 193

  Fly   220 PTVVACFCIYLACKWSRWEIPQSTEGKHWFYYVDKTVSLDLLKQLTDEFIAIYEK 274
            |.::|..|:::||      :.|..:.:.||  .:.:|.::.:.::....:.:||:
 Frog   194 PFMIALACLHVAC------VVQQKDARQWF--AELSVDMEKILEIIRVILKLYEQ 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycTNP_524127.2 CYCLIN_CCNT_rpt1 45..174 CDD:410241 42/143 (29%)
CYCLIN_CCNT_rpt2 179..268 CDD:410242 20/93 (22%)
ccncNP_989157.2 CYCLIN_CCNC_rpt1 40..146 CDD:410217 36/112 (32%)
CYCLIN_CCNC_rpt2 154..245 CDD:410218 22/100 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 252..283
Blue background indicates that the domain is not in the aligned region.

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