DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycT and ccnt1

DIOPT Version :9

Sequence 1:NP_001261992.1 Gene:CycT / 39961 FlyBaseID:FBgn0025455 Length:1097 Species:Drosophila melanogaster
Sequence 2:XP_005162427.1 Gene:ccnt1 / 334465 ZFINID:ZDB-GENE-030131-6397 Length:713 Species:Danio rerio


Alignment Length:766 Identity:257/766 - (33%)
Similarity:334/766 - (43%) Gaps:242/766 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ASGIPITANNNLPFEKDKIWYFSNDQLANSPSRRCGIKGDDELQYRQMTAYLIQEMGQRLQVSQL 90
            |:..|..:.||      ..|||:.:|:.||||||.|:..|.||.|||..|.|:|:|||||.||||
Zfish     2 AASFPSPSQNN------NKWYFTREQIENSPSRRAGLDPDKELSYRQQAANLLQDMGQRLNVSQL 60

  Fly    91 CINTAIVYMHRFYAFHSFTHFHRNSMASASLFLAAKVEEQPRKLEHVIRAANKCL------PPTT 149
            .||||||||||||...|||.||||.:|.|:||||||||||||||||||:..:.||      |.|.
Zfish    61 TINTAIVYMHRFYMVQSFTRFHRNVIAPAALFLAAKVEEQPRKLEHVIKVTHACLNPQDPSPDTR 125

  Fly   150 EQNYAELAQELVFNENVLLQTLGFDVAIDHPHTHVVRTCQLVK---------------------- 192
            ...|.:.||:||..|:::||||||::.|||||||||:..|||:                      
Zfish   126 SDTYLQQAQDLVILESIILQTLGFEITIDHPHTHVVKCTQLVRGENQLLTLNCASYCSVKGTSST 190

  Fly   193 -----------------ACKDLAQTSYFLASNSLHLTSMCLQYRPTVVACFCIYLACKWSRWEIP 240
                             |.|||||||||:|:||||||:.||||.|.:|||.||:||||||.||||
Zfish   191 PSSQISRLIMSFPFIVPASKDLAQTSYFMATNSLHLTTFCLQYSPPIVACVCIHLACKWSNWEIP 255

  Fly   241 QSTEGKHWFYYVDKTVSLDLLKQLTDEFIAIYEKSPARL--------------KSK--------- 282
            .||:||||:.|||.||:|:||.:||.||:.|.||:|:||              |||         
Zfish   256 VSTDGKHWWQYVDPTVTLELLDELTHEFLQILEKTPSRLKRTRNWKAAGQTAKKSKVQDGDQSEA 320

  Fly   283 ----------------LNSIKAIAQGAS-----------------------NRTANSKDKP---- 304
                            |.|:.|...|:|                       ..|||....|    
Zfish   321 IMNMISMSSSDSTLAGLTSLSAPPTGSSMDSCADEHSAAASAQHWQPPSKEQPTANELHAPAKVS 385

  Fly   305 ---------------KEDWKITE--MMKGYHSNITTPPELLNGNDSRDRDRDRERERERERDPSS 352
                           |.:.|..|  :.:||   .|....|:|   .:.:|:....::....|.::
Zfish   386 LSEYRAKHADELAAQKRELKNMEASVKQGY---ATAAQALMN---QQRKDKHHHHQQTSSSDTNN 444

  Fly   353 LLPPPAMVPQQRRQD---------------GGHQRSSSVSGVPGSSSSSSSSSHK----MPNYPG 398
            ..|....:|...|.:               |||..||      ||||..|....|    :|:..|
Zfish   445 PSPIVLKIPLDERSERSSIKMRLPVPGQSGGGHSHSS------GSSSRGSDQDIKVRIRVPDRRG 503

  Fly   399 GMPPDAHTDHKSKQ-PGYNNRMPSSHQRSSSSGLG-----SSGSGSQRSSSSSSSSSQQPGRPSM 457
            |...|..:..|.:: ..:::.....|..||||..|     ||.|.:|:.|:.||.||::....|:
Zfish   504 GSGEDGKSREKHRERSNHHHHHHHHHHHSSSSSAGSLSASSSSSSAQKHSAGSSGSSKKLSGDSV 568

  Fly   458 PVDYHKSSRGMPPVGVGMP------PHGSHKMTSGSKP--QQPQQQPVPH-------PSASNSSA 507
                ..||..|......||      .|.|.|::..|:.  |.|....:|.       ||..:...
Zfish   569 ----RTSSSSMSRKRTHMPDPSSSSTHSSSKVSKSSRNSFQLPTLPGLPSHVMPDILPSLHHQGN 629

  Fly   508 SGMSSKDKSQSNKMYPNAPPPYSNSAPQ-----------NPLMSRGGYPGASNGSQPPPP----- 556
            ...|..||:.:|.         .|:|.|           |.|:|       :.|.||..|     
Zfish   630 YSHSKTDKADTNG---------HNAAGQSNEYQDTFDMLNSLLS-------AQGVQPAQPQIFDY 678

  Fly   557 -AGYGGHRSKSGSTVHGMPPFEQQLPYSQSQSYGHMQQQPVPQSQQQQMPP 606
             :.||..|..||:.....||                   |:|......:||
Zfish   679 RSQYGEFRYSSGARGGAQPP-------------------PLPSEPPPPLPP 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycTNP_001261992.1 Cyclin_N 42..176 CDD:278560 84/139 (60%)
CYCLIN <203..>251 CDD:214641 34/47 (72%)
ccnt1XP_005162427.1 Cyclin_N 16..152 CDD:278560 83/135 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170584008
Domainoid 1 1.000 201 1.000 Domainoid score I2962
eggNOG 1 0.900 - - E1_COG5333
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 370 1.000 Inparanoid score I2085
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437076at2759
OrthoFinder 1 1.000 - - FOG0002290
OrthoInspector 1 1.000 - - otm24653
orthoMCL 1 0.900 - - OOG6_105617
Panther 1 1.100 - - LDO PTHR10026
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4505
SonicParanoid 1 1.000 - - X2329
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

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