DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycT and Ccnt1

DIOPT Version :9

Sequence 1:NP_001261992.1 Gene:CycT / 39961 FlyBaseID:FBgn0025455 Length:1097 Species:Drosophila melanogaster
Sequence 2:XP_008763967.1 Gene:Ccnt1 / 315291 RGDID:1311151 Length:724 Species:Rattus norvegicus


Alignment Length:822 Identity:274/822 - (33%)
Similarity:370/822 - (45%) Gaps:193/822 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NNNLPFEKDKIWYFSNDQLANSPSRRCGIKGDDELQYRQMTAYLIQEMGQRLQVSQLCINTAIVY 98
            |||      |.|||:.:||.||||||.|:..|.||.|||..|.|:|:|||||.||||.|||||||
  Rat     7 NNN------KRWYFTREQLENSPSRRFGVDSDKELSYRQQAANLLQDMGQRLNVSQLTINTAIVY 65

  Fly    99 MHRFYAFHSFTHFHRNSMASASLFLAAKVEEQPRKLEHVIRAANKC------LPPTTEQNYAELA 157
            |||||...|||.|||.|||.|:|||||||||||:||||||:.|:.|      ||.|..:.|.:..
  Rat    66 MHRFYMIQSFTQFHRYSMAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPDTRSEAYLQQV 130

  Fly   158 QELVFNENVLLQTLGFDVAIDHPHTHVVRTCQLVKACKDLAQTSYFLASNSLHLTSMCLQYRPTV 222
            |:||..|:::||||||::.|||||||||:..|||:|.|||||||||:|:||||||:..|||.|.|
  Rat   131 QDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATNSLHLTTFSLQYTPPV 195

  Fly   223 VACFCIYLACKWSRWEIPQSTEGKHWFYYVDKTVSLDLLKQLTDEFIAIYEKSPARLKSKLNSIK 287
            |||.||:||||||.||||.||:||||:.|||.||:|:||.:||.||:.|.||:|:|||...|   
  Rat   196 VACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHEFLQILEKTPSRLKRIRN--- 257

  Fly   288 AIAQGASNRTANSKDKPKEDWKITEMMKGYHSNITTPPELLNGNDSRDRDRDRERERERERDPSS 352
                                |      :.|.:.:.|.|:        ||..|   |...|:...:
  Rat   258 --------------------W------RAYQAAMKTKPD--------DRGAD---ENTSEQTILN 285

  Fly   353 LLPPPAMVPQQRRQDGGHQRSSSVSGVPGSSSSSSSSSHKMPNYPGGMPPDAHTDH--------- 408
            ::                .::||.:.:.|..|.|::|:..:|:.|......:....         
  Rat   286 MI----------------SQTSSDTTIAGLMSMSAASTGAVPSLPASEESSSSLTSVDMLQGERW 334

  Fly   409 KSKQPGYNNRMPSSHQRSSSSGLGSSGSGSQRSSSSSSSSSQQPGRPSMPVDYHKSSRGMPPVGV 473
            .|.||.:.......|:.|.:..|.......|...|::..|.:|            :|:.:|...|
  Rat   335 LSSQPPFKLEASQGHRTSENLALIGVDHSLQHDGSNAFVSQKQ------------TSKSVPSAKV 387

  Fly   474 GMPPH-GSHKMTSGSKPQQPQQQPVPHPSASNSSASGMSSKDKSQS--NKM----YPNAPPPYSN 531
            .:..: ..|.....::.:|.:.......|....:|..:.|.|...|  .||    ..|...|:.:
  Rat   388 SLKEYRAKHAEELAAQKRQLENMEANVKSQYAYAAQNLLSHDSHSSVILKMPIEGSENPERPFLD 452

  Fly   532 SAPQNPLMSR----GGYPGASNGSQPPP--------PAGYGGHRSKSGSTVHGMPPFEQQLPY-- 582
            .|.::.|..|    ||...||  |:|..        .|| ..|.|...|........|:|..:  
  Rat   453 KADKSALKMRLPVAGGDKAAS--SKPEEIKMRIKVHSAG-DKHNSVEDSVAKSREHKEKQRTHPS 514

  Fly   583 -------SQSQSYGHMQQQPVPQSQQQQMPPEASQ-----HSLQSKNSLFS----------PEW- 624
                   ..|..:.|:|....|.|::...|..:||     |...|.:|..|          ||. 
  Rat   515 NHHHHHNHHSHKHSHLQLPVGPVSKRPSDPKHSSQTSTLAHKTYSLSSTLSSSSSTRKRGPPEET 579

  Fly   625 --------PDIKKEPMSQSQPQPFNGLLPPPAP-----PGHDYKLNSHPRDKESPKKERLTPTKK 676
                    ..|.|...|.|...||     ||.|     |||....:..|..:.| .|.|:...|.
  Rat   580 GAAVFDHPAKIAKSTKSSSLNFPF-----PPLPTMTQLPGHSSDTSGLPFSQPS-CKTRVPHVKL 638

  Fly   677 DKHRPVMPPVGSGNSSSGS----------------GSSKPMLPPHKKQIPHGGDLLTNPGESGSL 725
            ||.    ||..:|::::.|                ...:|..||..:.:...|:.: ||..:|  
  Rat   639 DKG----PPGANGHNTTQSIDYQDTVNMLHSLLSAQGVQPTQPPAFEFVHSYGEYM-NPRAAG-- 696

  Fly   726 KRPNEISGSQYGLNKLDEIDNSNMPREKLRKLDTTTGLPTYP 767
                 ||.|          .|::.||......:....||..|
  Rat   697 -----ISRS----------GNTDKPRPPPLPSEPPPPLPPLP 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycTNP_001261992.1 Cyclin_N 42..176 CDD:278560 86/139 (62%)
CYCLIN <203..>251 CDD:214641 34/47 (72%)
Ccnt1XP_008763967.1 Cyclin_N 13..149 CDD:278560 84/135 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343753
Domainoid 1 1.000 166 1.000 Domainoid score I3782
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 341 1.000 Inparanoid score I2276
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437076at2759
OrthoFinder 1 1.000 - - FOG0002290
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105617
Panther 1 1.100 - - O PTHR10026
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2329
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.900

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