DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycT and Ccnt2

DIOPT Version :10

Sequence 1:NP_524127.2 Gene:CycT / 39961 FlyBaseID:FBgn0025455 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_001100641.1 Gene:Ccnt2 / 304758 RGDID:1309205 Length:722 Species:Rattus norvegicus


Alignment Length:812 Identity:274/812 - (33%)
Similarity:382/812 - (47%) Gaps:170/812 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 WYFSNDQLANSPSRRCGIKGDDELQYRQMTAYLIQEMGQRLQVSQLCINTAIVYMHRFYAFHSFT 109
            |:|:.:||.|:||||||::.|:||.:||..|.|||:|||||.||||.||||||||||||..||||
  Rat    11 WFFTREQLENTPSRRCGVEADEELSHRQQAANLIQDMGQRLNVSQLTINTAIVYMHRFYMHHSFT 75

  Fly   110 HFHRNSMASASLFLAAKVEEQPRKLEHVIRAANKCLPP------TTEQNYAELAQELVFNENVLL 168
            .|:||.::..:||||||||||.|||||||:.|:.||.|      |....|.:..||||..|.::|
  Rat    76 KFNRNIISPTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQTQELVLLETIML 140

  Fly   169 QTLGFDVAIDHPHTHVVRTCQLVKACKDLAQTSYFLASNSLHLTSMCLQYRPTVVACFCIYLACK 233
            |||||::.|:||||.||:..|||:|.|||||||||:|:||||||:.||||:|||:||.||:||||
  Rat   141 QTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACK 205

  Fly   234 WSRWEIPQSTEGKHWFYYVDKTVSLDLLKQLTDEFIAIYEKSPARLKSKLNSIKAIAQGASNRTA 298
            ||.||||.||:||||:.|||.||:|:||.:||.||:.|.||:|:||| ::.:.:|:|:       
  Rat   206 WSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQILEKTPSRLK-RIRNWRAMAK------- 262

  Fly   299 NSKDKPKEDWKITEMMKGYHSNITTP---PELLNGNDSRDRDRDRERERERERDPSSLLPPP--- 357
                |||.|.:::|          ||   ..|:..:...|...........::..:|..|.|   
  Rat   263 ----KPKVDGQVSE----------TPLLGSSLVQNSILVDSVTGVPANPSFQKPSTSTFPAPLPL 313

  Fly   358 ----AMVPQQRRQDGGHQRSSSVSGVPGSSSSSSSSSHKMPNYPGGMPPDAHTDHKSKQPGYNNR 418
                ..|...|..|.|    |.::|:| |||.:.||..:.|::    |..|.||     |.|..:
  Rat   314 TSGSTSVQDGRASDTG----SVLAGMP-SSSYTVSSHQEWPHH----PDSARTD-----PVYTQK 364

  Fly   419 MPSSHQRSSSSGLGSSGSGSQ----RSSSSSSSSSQQPGRPSMPVDYHKSSRGMPPVGVGMPPHG 479
            ..::.            ||||    :...|.:..|....||....|:..:.:.....|.....||
  Rat   365 QEATL------------SGSQYLSFQQGPSMALHSGLHHRPDKVADHSSAKQEYTHKGGSSKHHG 417

  Fly   480 SHKMTSGSKPQQPQQQPVPHPSASNSSASGMSSKDKSQSNKMYPNAPPPYSNSAPQNPLMSRGGY 544
            ....|.|..||:                   .|.||.:..:.....           .|.||..|
  Rat   418 PIPATPGVVPQK-------------------MSLDKYREKRKLETL-----------DLDSRDHY 452

  Fly   545 PGASNGSQPPPPAGYGGHRSKSGSTVHGMPPFEQQLPYSQS-QSYGHMQQQ-----------PVP 597
            ..|....|..    :|..::.:|::|  ..|.:.:||.:.| :...|:.::           |:|
  Rat   453 MAAHAEQQHK----HGPAQAVAGTSV--TSPIKMKLPLTNSDKPEKHLAEKRERSGSLKLRIPIP 511

  Fly   598 QSQQQQMPPE--ASQHSLQSKNSLFSPEWPDIKKEPMSQSQPQPFNGLLPPPAPPGHDYKLNSHP 660
                   ||:  .|:..|:.|..:.|.|......|...:|:..      .|.....|..|...||
  Rat   512 -------PPDKGPSKEELKMKIKVSSSERHSSSDEGSGKSKHS------SPHISRDHKEKHKEHP 563

  Fly   661 --RDKESPKKERLTPTKKDKHRPVMP------PVGSGNSSSGSGSSKPMLPPHKKQIPHGGDLLT 717
              |...|.|...:..:...||...||      |||.|.....||      |..:|:: |..|...
  Rat   564 ANRHHSSHKHLHMHSSGGSKHADGMPPTVLRSPVGLGPEGISSG------PSARKKL-HINDASH 621

  Fly   718 NPGESGSLKRPNEISGS--------QYGLNKLDEIDNSNMP-------------REKLRKLDTTT 761
            |  ....:.:.::.|||        || |:....:.|..:|             ...|.|||...
  Rat   622 N--HHSKMSKSSKSSGSSSSSSSVKQY-LSSHSSVFNHPLPPPPPVTYQVGYGHLSTLVKLDKKP 683

  Fly   762 GLPTYPNYEEKHTPLNMSNGIETTPDLVRSLL 793
            ..|..|....:::..:.....:.|.|::.|||
  Rat   684 VEPHGPEANHEYSTSSQHMDYKDTFDMLDSLL 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycTNP_524127.2 CYCLIN_CCNT_rpt1 45..174 CDD:410241 81/134 (60%)
CYCLIN_CCNT_rpt2 179..268 CDD:410242 63/88 (72%)
Ccnt2NP_001100641.1 CYCLIN_CCNT2_rpt1 8..146 CDD:410299 81/134 (60%)
CYCLIN_CCNT2_rpt2 150..259 CDD:410301 72/109 (66%)

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