Protein Alignment CycT and Ccnl2

DIOPT Version :10

• Sequence 1: NP_524127.2
• Gene: CycT / 39961
• FlyBaseID: FBgn0025455
• Length: 1097
• Species: Drosophila melanogaster
• Sequence 2: XP_006239606.1
• Gene: Ccnl2 / 298686
• RGDID: 1309149
• Length: 521
• Species: Rattus norvegicus
• Alignment Length: 531
• Identity: 143/531 - (26%)
• Similarity: 212/531 - (39%)
• Gaps: 119/531 - (22%)

  Fly     8 MPQAATASSSSSASAAASA----------SGIPITANNNLPFEKDKIWYFSNDQLANSPSRRCGI 62
            |..|..|.||.|..||..:          ||:.||..|.|         ..:|:|..:||...|:
  Rat    12 MAPALAACSSGSGGAAPGSQGVLIGDRLYSGVLITLENCL---------LPDDKLRFTPSMSSGL 67

  Fly    63 KGDDELQYRQMTAYLIQEMGQRLQVSQLCINTAIVYMHRFYAFHSFTHFHRNSMASASLFLAAKV 127
            ..|.|...|.:...|||..|..|::.|:.:.|..|...||:...||.......::.|.:.||:|:
  Rat    68 DIDTETGLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKI 132

  Fly   128 EEQPRKLEHVI---------RAANKCLPPTTEQNYAELAQELVFNENVLLQTLGFDVAIDHPHTH 183
            ||.||::..||         |...|.:|...:|.|..|..:::..|..:|:.|||.|.:.|||..
  Rat   133 EEAPRRIRDVINVFHRLRHLREKKKPVPLVLDQEYVNLKNQIIKAERRVLKELGFCVHVKHPHKI 197

  Fly   184 VVRTCQLVKACKD--LAQTSYFLASNSLHLTSMCLQYRPTVVACFCIYLACKWSRWEIPQSTEGK 246
            :|...|:::..::  |.||::...::||. |.:.::::|..:||.|||||.:  ..|||.... .
  Rat   198 IVMYLQVLECERNQHLVQTAWNYMNDSLR-TDVFVRFQPESIACACIYLAAR--TLEIPLPNR-P 258

  Fly   247 HWF-------------------YYVDKTVSLDLLKQLTDEFIAIYEKSPARLKSKLNSIKAIAQG 292
            |||                   .|..|.|.|..|:...::.....|::.||.|..|.  ...|.|
  Rat   259 HWFLLFGATEEEIQEICFKILQLYTRKKVDLTHLESEVEKRKHAIEEAKARAKGLLP--PGSAPG 321

  Fly   293 ASNRTANSKDKPKEDWKITEMMKGYHSNITTP------------PE----------LLNGNDSRD 335
            ..:.||.....||.    .|..|....:.::|            |:          ||.|.:||.
  Rat   322 LDSATAGFSPAPKP----VESPKEGKGSKSSPLSVKNAKRKMEGPKKAKGDSPVNGLLKGQESRS 382

  Fly   336 RDRDRERERERERDPSSLLPPPAMVPQQRRQDGGHQRSSSVSGVPGSSSSSSSSS---------H 391
            :.|.||:...|.       |..:..|::|:.|.|     |.||  ||.|.|.|.|         |
  Rat   383 QSRSREQSYSRS-------PSRSASPKRRKSDSG-----STSG--GSKSQSRSRSRSDSPPRQVH 433

  Fly   392 KMPNYPGGMPPDAHTDHKSKQPGYNNRMP-SSHQRSSSSGLGSSGSGSQRSSSSSSSSSQQPGRP 455
            :...|.|.   :.....|||...:..:.| .|..||||           ||.|.|...:...|:.
  Rat   434 RGAPYKGS---EVRGSRKSKDCKHLTQKPHKSRSRSSS-----------RSRSRSRERTDSSGKY 484

  Fly   456 SMPVDYHKSSR 466
            .....|::..|
  Rat   485 KKKSHYYRDQR 495

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycT	NP_524127.2	CYCLIN_CCNT_rpt1	45..174	CDD:410241	40/137 (29%)
		CYCLIN_CCNT_rpt2	179..268	CDD:410242	30/109 (28%)
Ccnl2	XP_006239606.1	CYCLIN_CCNL2_rpt1	33..188	CDD:410293	46/163 (28%)
		CYCLIN_CCNL2_rpt2	193..315	CDD:410296	34/125 (27%)