Protein Alignment CycT and pch1

DIOPT Version :10

• Sequence 1: NP_524127.2
• Gene: CycT / 39961
• FlyBaseID: FBgn0025455
• Length: 1097
• Species: Drosophila melanogaster
• Sequence 2: NP_001342735.1
• Gene: pch1 / 2540237
• PomBaseID: SPBC32F12.06
• Length: 342
• Species: Schizosaccharomyces pombe
• Alignment Length: 326
• Identity: 85/326 - (26%)
• Similarity: 148/326 - (45%)
• Gaps: 28/326 - (8%)

  Fly    45 WYFSNDQLANSPSRRCGIKGDDELQYRQMTAYLIQEMGQRLQVSQLCINTAIVYMHRFYAFHSFT 109
            |..|.|||..:||...||..|.|...|......|..:|.||::.|..:.||.:|.||||...|..
pombe    18 WIISKDQLVFTPSALDGIPLDQEEIQRSKGCNFIINVGLRLKLPQTALATANIYFHRFYLRFSLK 82

  Fly   110 HFHRNSMASASLFLAAKVEEQPRKLEHVI----RAANK---CLPPTTEQNYAELAQELVFNENVL 167
            ::|...:|:..:|||.|||:..|||..::    :.|.|   .|.....:.|......:::.|.||
pombe    83 NYHYYEVAATCIFLATKVEDSVRKLRDIVINCAKVAQKNSNVLVDEQTKEYWRWRDVILYTEEVL 147

  Fly   168 LQTLGFDVAIDHPHTHVVRTC-QLVKACKDLAQTSYFLASNSLHLTSMCLQYRPTVVACFCIYLA 231
            |:.|.||..::||:.:|:... :.|...|::.:.::...::|.. :..||.|.|..:|......|
pombe   148 LEALCFDFTVEHPYPYVLSFIKKFVADDKNVTKVAWTYINDSTR-SIACLLYSPKTIAAAAFQFA 211

  Fly   232 CKWSRWEIPQSTEG-KHWFYYVDKTVSLDLLKQLTDEFIAIYEK-SPAR----LKSKLNS-IKAI 289
            .:.:...:..:|:| ..|.  .:..||.:.:|.:.....::|:| :|::    :..|..| ..::
pombe   212 LEKNEINLSTTTDGLPVWM--EESQVSYEDVKGVLTLIDSLYKKINPSKQALPIDQKNGSHASSV 274

  Fly   290 AQGASNRTAN-SKDKPKEDWKITEMMKGYHS-NITTP------PELLN--GNDSRDRDRDRERER 344
            |.|..:..|: |.....:....:.....:|| |..||      .::|:  ....:..|.|:|.|.
pombe   275 APGTPSSLASVSTQATPQHQNSSGRTDSFHSLNTETPSKSTVDDQILSTAAQPKKSSDTDKEMET 339

  Fly   345 E 345
            |
pombe   340 E 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycT	NP_524127.2	CYCLIN_CCNT_rpt1	45..174	CDD:410241	45/135 (33%)
		CYCLIN_CCNT_rpt2	179..268	CDD:410242	18/90 (20%)
pch1	NP_001342735.1	CCL1	1..323	CDD:227640	80/307 (26%)