DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycT and cyh-1

DIOPT Version :10

Sequence 1:NP_524127.2 Gene:CycT / 39961 FlyBaseID:FBgn0025455 Length:1097 Species:Drosophila melanogaster
Sequence 2:NP_001379352.1 Gene:cyh-1 / 190078 WormBaseID:WBGene00021714 Length:337 Species:Caenorhabditis elegans


Alignment Length:376 Identity:70/376 - (18%)
Similarity:135/376 - (35%) Gaps:102/376 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 WYFSNDQLA------NSPSRRCGIKGDDELQYRQMTAYLIQEMGQRLQ--VSQLCIN-------- 93
            |.::.::||      |...|:   |.:..:|..::..::..|...|:|  :....:.        
 Worm    11 WTYTPEKLAAMRLEINIKFRQ---KYESVMQPDELELFVTPEEELRMQRSIEDAALKFADKFRPH 72

  Fly    94 -------TAIVYMHRFYAFHSFTHFHRNSMASASLFLAAKVEEQPRKLEHVIRAANKCLPPTTEQ 151
                   ||:.:..|.:.....:......:..|..:||.|::|....:|..::...........|
 Worm    73 IWPSVKWTALAFFKRAFLVWVPSDTSIRMVMMACFYLAMKIDEFYITIEDFVKNMKSYSVGEPRQ 137

  Fly   152 NYAELAQELVFNENVLLQTLGFDVAIDHPHT----HVV----RTCQLVKACKDLAQTSYFLASNS 208
            |    |:.::..|..|::.|.:::.:..|:.    |::    |...|....:.:.:.|.....|:
 Worm   138 N----AERILKLEPELMKILDYNLTVHCPYRPYEGHLMDMKTRMLLLNFDLESIRRDSMRFFQNA 198

  Fly   209 LHLTSMCLQYRPTVVACFCIYLACKWSRWEIPQSTEGKHWFYYVDKTVSLDLLKQLTDEFIAIYE 273
            |. |.:.|.|.|:.:|...|       .:.:.....||          |.::|::...:.|.|.|
 Worm   199 LQ-TDVLLLYPPSQIALAAI-------NFGLHAQVSGK----------SDEILREFLRKLIGIEE 245

  Fly   274 KSPARLKSKLNSIKAIAQGASNRTANSKDKPKEDWKITEMMKGYHSNITTPPELLNGNDSRDRDR 338
            .|.|                 :|.|..:|..|.:..:|.:                ....|:.||
 Worm   246 DSWA-----------------HRDARPEDLEKLEKTVTRV----------------NQIMREVDR 277

  Fly   339 D--RERERERERDPSSLLPPPAMVP--QQRRQD----GGHQRSSSVSGVPG 381
            :  ...|:|||...|.|....|::|  .:||::    ||     .|..:||
 Worm   278 NFVAVTEQERENHKSQLARIQALIPALDERRKEQWLAGG-----GVGLMPG 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycTNP_524127.2 CYCLIN_CCNT_rpt1 45..174 CDD:410241 25/151 (17%)
CYCLIN_CCNT_rpt2 179..268 CDD:410242 17/96 (18%)
cyh-1NP_001379352.1 CYCLIN_CCNH_rpt1 3..157 CDD:410228 25/152 (16%)
CYCLIN_CCNH_rpt2 160..310 CDD:410229 40/200 (20%)

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