DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7542 and Ctrb1

DIOPT Version :10

Sequence 1:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_079859.2 Gene:Ctrb1 / 66473 MGIID:88559 Length:263 Species:Mus musculus


Alignment Length:266 Identity:84/266 - (31%)
Similarity:137/266 - (51%) Gaps:24/266 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLVCVLLVGS---C---TAVPLLTDVEPYITNGEPAEVGQFPYQAGLNVSFGNWSTWCGGTLISH 62
            |:.|..|||:   |   ...|:||.:. .|.|||.|..|.:|:|..|....|  ..:|||:|||.
Mouse     6 LVSCFALVGATFGCGVPAIQPVLTGLS-RIVNGEDAIPGSWPWQVSLQDRTG--FHFCGGSLISE 67

  Fly    63 YWIITAAHCMDGAESVTVYLGAINIGDESEEG--QERIMVEK-SGIIVHSNYMASTVVNDISLIR 124
            .|::|||||  |.::..|.     :..|.::|  :|.:.|.| :.:..:..:.:.||.|||:|::
Mouse    68 NWVVTAAHC--GVKTTDVV-----VAGEFDQGSDEENVQVLKIAQVFKNPKFNSFTVRNDITLLK 125

  Fly   125 LPAFVGFTDRIRAASLPRRLNGQFPTYESIRAFASGWGRESDASDSVSPVLRYVEMPIMPHSLCR 189
            |.....|::.:.|..|| .::..||.  ......:|||:....:......|:...:||:..:.|:
Mouse   126 LATPAQFSETVSAVCLP-TVDDDFPA--GTLCATTGWGKTKYNALKTPDKLQQAALPIVSEAKCK 187

  Fly   190 MYWSGAVSEKMICMSTTSGKSTCHGDSGGPLVYKQGNSSYLIGSTSFGTSMGCQVGFPAVFTRIS 254
            ..|...:::.||| :..||.|:|.||||||||.::.....|.|..|:|:.. |....|||:.|::
Mouse   188 ESWGSKITDVMIC-AGASGVSSCMGDSGGPLVCQKDGVWTLAGIVSWGSGF-CSTSTPAVYARVT 250

  Fly   255 SYLDWI 260
            :.:.|:
Mouse   251 ALMPWV 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 75/237 (32%)
Ctrb1NP_079859.2 Tryp_SPc 34..259 CDD:238113 75/237 (32%)

Return to query results.
Submit another query.