DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7542 and ctrl

DIOPT Version :10

Sequence 1:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001015686.1 Gene:ctrl / 548358 XenbaseID:XB-GENE-5876074 Length:263 Species:Xenopus tropicalis


Alignment Length:277 Identity:91/277 - (32%)
Similarity:141/277 - (50%) Gaps:31/277 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLVCVLLVGS---CTAVPLLTDVEPY--ITNGEPAEVGQFPYQAGLNVSFGNWSTWCGGTLISHY 63
            ||.|:.|:||   |.:..:...:..|  |.|||.|..|.:|:|..|..|.|  ..:|||::||.:
 Frog     6 LLSCIALIGSTYGCGSPAISPVLSGYARIVNGENAVPGSWPWQVSLQDSTG--FHFCGGSVISDF 68

  Fly    64 WIITAAHCMDGAESVT----VYLGAINIGDESEEGQERIMVEKSGIIVHSNYMASTVVNDISLIR 124
            |::|||||     .||    |.||..:....:|..|.:.:.:   :..|.||.:.|:.|||:|::
 Frog    69 WVVTAAHC-----GVTTAHRVILGEYDRSSPAEPIQTKTIAK---VFRHPNYNSFTIANDITLLK 125

  Fly   125 LPAFVGFTDRIR---AASLPRRLNGQFPTYESIRAFASGWGRESDASDSVSPVLRYVEMPIMPHS 186
            |.:...|::.:.   .||.....||      ..|...:|||....||......|:.|.:|::.::
 Frog   126 LSSPASFSNIVAPVCVASSSDAFNG------GERCVTTGWGYVDAASRLTPNKLQQVALPLLSNT 184

  Fly   187 LCRMYWSGAVSEKMICMSTTSGKSTCHGDSGGPLVYKQGNSSYLIGSTSFGTSMGCQVGFPAVFT 251
            .|:.||...:...|:| :..||.|:|.||||||||.::..:..|.|..|:|:|. |....|.|:.
 Frog   185 ECQRYWGSKILNTMVC-AGASGASSCMGDSGGPLVCQRNGAWVLAGIVSWGSST-CSPSSPGVYA 247

  Fly   252 RISSYLDWILNHIIAHN 268
            |:|:...| ::..||.|
 Frog   248 RVSTLRSW-MDQTIAAN 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 80/242 (33%)
ctrlNP_001015686.1 Tryp_SPc 34..259 CDD:238113 80/243 (33%)

Return to query results.
Submit another query.