DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7542 and Tmprss2

DIOPT Version :10

Sequence 1:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_056590.2 Gene:Tmprss2 / 50528 MGIID:1354381 Length:490 Species:Mus musculus


Alignment Length:250 Identity:78/250 - (31%)
Similarity:118/250 - (47%) Gaps:40/250 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GLNVSFGNWSTW-----------CGGTLISHYWIITAAHCMDGAESV----TVYLGAIN-----I 87
            |||.|.|:| .|           |||::|:..||:|||||::...|.    |.:.|.:.     .
Mouse   257 GLNASPGDW-PWQVSLHVQGVHVCGGSIITPEWIVTAAHCVEEPLSSPRYWTAFAGILRQSLMFY 320

  Fly    88 GDESEEGQERIMVEKSGIIVHSNYMASTVVNDISLIRLPAFVGFTDRIRAASLPRRLNGQFPTYE 152
            |       .|..|||  :|.|.||.:.|..|||:|::|...:.|.|.::...||.  .|.....:
Mouse   321 G-------SRHQVEK--VISHPNYDSKTKNNDIALMKLQTPLAFNDLVKPVCLPN--PGMMLDLD 374

  Fly   153 SIRAFASGWGRESDASDSVSPVLRYVEMPIMPHSLC--RMYWSGAVSEKMICMSTTSGK-STCHG 214
            . ..:.||||...: ....|.||....:|::..|.|  :..::..::..|||.....|. .:|.|
Mouse   375 Q-ECWISGWGATYE-KGKTSDVLNAAMVPLIEPSKCNSKYIYNNLITPAMICAGFLQGSVDSCQG 437

  Fly   215 DSGGPLVYKQGNSSYLIGSTSFGTSMGCQVGF-PAVFTRISSYLDWILNHIIAHN 268
            |||||||..:....:|||.||:|:  ||.... |.|:..::.:.|||...:.|::
Mouse   438 DSGGPLVTLKNGIWWLIGDTSWGS--GCAKALRPGVYGNVTVFTDWIYQQMRANS 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 77/243 (32%)
Tmprss2NP_056590.2 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747
Tryp_SPc 254..485 CDD:238113 77/243 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.