DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7542 and CG4815

DIOPT Version :10

Sequence 1:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_651607.1 Gene:CG4815 / 43360 FlyBaseID:FBgn0039568 Length:265 Species:Drosophila melanogaster


Alignment Length:229 Identity:54/229 - (23%)
Similarity:88/229 - (38%) Gaps:47/229 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 PYITNGEPAEVGQFPYQAGLNVS-FGNWSTWCGGTLISHYWIITAAHCMDGAESVTVYLGAINIG 88
            |.|.||....|...   .|:.:. |......|..||::...|:|||||.:.......::    ||
  Fly    33 PRIYNGIKTTVESL---GGVGIQLFNGRKLVCSATLLTPRHILTAAHCFENLNRSKFHV----IG 90

  Fly    89 DESEE----GQERIMVEKSGII---VHSNYMASTVVNDISLIRL-----PAFVGFTDRIRAASLP 141
            .:|.|    |..   ..|:.:|   :|..|.....:.|:::.:.     ..::|:....|:...|
  Fly    91 GKSAEFTWHGNN---FNKNKLIRVQIHPKYAKMKFIADVAVAKTKYPLRSKYIGYAQLCRSVLHP 152

  Fly   142 RRLNGQFPTYESIRAFASGWGRESDASD-SVSPVLRYVEMPIMPHSLCRMYWSGAVSEKMICMST 205
            |.           :..|:|||.|....| |.....|.:::.|:....|.......:...:||...
  Fly   153 RD-----------KLIAAGWGFEGGVWDESRKKTFRSMKVGIVSKRDCEKQLDRKMPPNIICAGA 206

  Fly   206 TSGKSTCHGDSGGPLV------------YKQGNS 227
            .:.|:.|.|||||||:            :|.||:
  Fly   207 YNNKTLCFGDSGGPLLLGRQVCGINTWTFKCGNN 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 53/227 (23%)
CG4815NP_651607.1 Tryp_SPc 49..259 CDD:473915 48/210 (23%)

Return to query results.
Submit another query.