DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7542 and LOC3291827

DIOPT Version :10

Sequence 1:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_552698.4 Gene:LOC3291827 / 3291827 VectorBaseID:AGAMI1_012285 Length:395 Species:Anopheles gambiae


Alignment Length:276 Identity:93/276 - (33%)
Similarity:132/276 - (47%) Gaps:41/276 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VGSC--TAVPLLTDVEPYITNGEPAEVGQFPYQAGLNVSFGNWST---WCGGTLISHYWIITAAH 70
            :..|  |||.|:.|       ||.|:..:||:.|  .:.||....   .|||:|:|..:|:||.|
Mosquito   138 IDKCGHTAVELIVD-------GELAKAREFPHMA--LIGFGEAPEIRYLCGGSLVSDRFILTAGH 193

  Fly    71 CMDGAE---SVTVYLGAINIGDESEEG--QERIMVEKSGIIVHSNYMASTVVNDISLIRLPAFVG 130
            |:....   :..|.||..::...::|.  ::..:.|:   |.|..|..::..|||:||:|...|.
Mosquito   194 CLTSTNFGPATIVRLGEFSLASSTDEAFPEDYDIAER---IPHPEYKQTSHYNDIALIKLNRKVI 255

  Fly   131 FTDRIRAASLPRRLNGQFPTYESIRAFASGWGRESDASDSVSPVLRYVEMPIMPHSLC------- 188
            |:...|...||  |....|   ..||.|:|||......:..|.:|: |.:.:.....|       
Mosquito   256 FSPYARPICLP--LQAAIP---QKRAIATGWGAIGFGLEQSSSLLK-VTLDMFRFEECKDQFEPT 314

  Fly   189 RMYWSGAVSEKMICM-STTSGKSTCHGDSGGPL-VYKQGN--SSY-LIGSTSFGTSMGCQVGFPA 248
            |...:|..:...:|. |..|.|.||.||||||| ||...|  .:| :||.||||.:.|. .|.||
Mosquito   315 RKLRTGLNATTQMCAGSRNSTKDTCQGDSGGPLQVYNDANVYCTYTIIGVTSFGQNCGL-AGVPA 378

  Fly   249 VFTRISSYLDWILNHI 264
            |:|.:.|||.||.|.|
Mosquito   379 VYTTVYSYLSWIENLI 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 85/255 (33%)
LOC3291827XP_552698.4 None

Return to query results.
Submit another query.