DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7542 and Tmprss13

DIOPT Version :10

Sequence 1:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_063121182.1 Gene:Tmprss13 / 300682 RGDID:1310872 Length:552 Species:Rattus norvegicus


Alignment Length:246 Identity:82/246 - (33%)
Similarity:124/246 - (50%) Gaps:29/246 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ITNGEPAEVGQFPYQAGLNVSFGNWSTWCGGTLISHYWIITAAHC--------MDGAESVTVYLG 83
            |..|......::|:|..|:  ||. :..||||||...|::|||||        ::|.:   ||.|
  Rat   311 IVGGALTSESKWPWQVSLH--FGT-THICGGTLIDAQWVLTAAHCFFVTREKILEGWK---VYAG 369

  Fly    84 AINIGDESEEGQERIMVEKSGIIVHSNYMASTVVNDISLIRLPAFVGFTDRIRAASLPRRLNGQ- 147
            ..|:....|      ....|.||::.||.......||:|:||...:..:..|..|.||  |:|| 
  Rat   370 TSNLHQLPE------AASISQIIINGNYTDEQDDYDIALVRLSKPLTLSAHIHPACLP--LHGQT 426

  Fly   148 FPTYESIRAFASGWGRESDASDSVSPVLRYVEMPIMPHSLCRMY--WSGAVSEKMICM-STTSGK 209
            |...|:  .:.:|:|:..:..:..||.||.|::.::....|..|  :...::.:|:|. ....|:
  Rat   427 FGLNET--CWITGFGKTKETDEKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGGR 489

  Fly   210 STCHGDSGGPLVYKQGNSSYLIGSTSFGTSMGCQVGFPAVFTRISSYLDWI 260
            .:|.||||||||.:|.|..||.|.||:||..| |...|.|:|:::..|.||
  Rat   490 DSCQGDSGGPLVCEQNNRWYLAGVTSWGTGCG-QKNKPGVYTKVTEVLPWI 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 82/246 (33%)
Tmprss13XP_063121182.1 None

Return to query results.
Submit another query.