DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7542 and Klk1

DIOPT Version :10

Sequence 1:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_036725.2 Gene:Klk1 / 24523 RGDID:2969 Length:261 Species:Rattus norvegicus


Alignment Length:276 Identity:77/276 - (27%)
Similarity:118/276 - (42%) Gaps:46/276 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLVCVLLVGSCTAVPLLTDVEPYITNGEPAEVGQFPYQAGLNVSFGNWSTWCGGTLISHYWIITA 68
            :|...|.:|...|.|   ..:..:..|...|....|:|..| .||..:  .|||.||...|:|||
  Rat     5 ILFLDLSLGQIDAAP---PGQSRVIGGYKCEKNSQPWQVAL-YSFSKY--LCGGVLIDPSWVITA 63

  Fly    69 AHCMDGAESVTVYLGAINIGDESEEGQERIMVEKSGIIVHSNYMASTV-----------VNDISL 122
            |||  .:.:..|:||..|:.::....|.|::   |....|.:|....:           .||:.|
  Rat    64 AHC--SSNNYQVWLGRNNLLEDEPFAQHRLV---SQSFPHPDYKPFLMRNHTRKPGDDHSNDLML 123

  Fly   123 IRLPAFVGFTDRIRAASLPRRLNGQFPTYESIRAFASGWGRESDASDSVSPV-------LRYVEM 180
            :.|......||.::...||.    :.|...| ...|||||       |..|:       |:.|.:
  Rat   124 LHLSQPADITDGVKVIDLPT----EEPKVGS-TCLASGWG-------STKPLIWEFPDDLQCVNI 176

  Fly   181 PIMPHSLCRMYWSGAVSEKMICM-STTSGKSTCHGDSGGPLVYKQGNSSYLIGSTSFGTSMGCQV 244
            .::.:..|...:...|::.|:|. ....||.||.|||||||:.    ...|.|.||:|:....:.
  Rat   177 HLLSNEKCIKAYKEKVTDLMLCAGELEGGKDTCTGDSGGPLLC----DGVLQGITSWGSVPCAKT 237

  Fly   245 GFPAVFTRISSYLDWI 260
            ..||::|::..:..||
  Rat   238 NMPAIYTKLIKFTSWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 72/253 (28%)
Klk1NP_036725.2 Tryp_SPc 24..253 CDD:214473 70/252 (28%)

Return to query results.
Submit another query.