DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7542 and St14

DIOPT Version :10

Sequence 1:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:247 Identity:72/247 - (29%)
Similarity:121/247 - (48%) Gaps:25/247 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ITNGEPAEVGQFPYQAGLNVSFGNWSTWCGGTLISHYWIITAAHCMDGAESV---------TVYL 82
            :..|..|:.|::|:|..|: :.|. ...||.:|||..|:::||||... |::         |.:|
  Rat   615 VVGGTNADEGEWPWQVSLH-ALGQ-GHLCGASLISPDWLVSAAHCFQD-ETIFKYSDHTMWTAFL 676

  Fly    83 GAINIGDESEEGQERIMVEKSGIIVHSNYMASTVVNDISLIRLPAFVGFTDRIRAASLPRRLNGQ 147
            |.::....|..|.:...:::  ||.|.::...|...||:|:.|.....::..:|...||...: .
  Rat   677 GLLDQSKRSASGVQEHKLKR--IITHPSFNDFTFDYDIALLELEKPAEYSTVVRPICLPDNTH-V 738

  Fly   148 FPTYESIRAFASGWGRESDASDSVSPVLRYVEMPIMPHSLCRMYWSGAVSEKMICMSTTS-GKST 211
            ||..::|  :.:|||...:.... :.:|:..|:.::..:.|.......::.:|:|:...| |..:
  Rat   739 FPAGKAI--WVTGWGHTKEGGTG-ALILQKGEIRVINQTTCEELLPQQITPRMMCVGFLSGGVDS 800

  Fly   212 CHGDSGGPL--VYKQGNSSYLIGSTSFGTSMGC-QVGFPAVFTRISSYLDWI 260
            |.|||||||  |.|.|. .:..|..|:|.  || |...|.|:|||....|||
  Rat   801 CQGDSGGPLSSVEKDGR-IFQAGVVSWGE--GCAQRNKPGVYTRIPEVRDWI 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 72/247 (29%)
St14NP_446087.1 SEA 88..178 CDD:460188
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001
LDLa 454..486 CDD:238060
LDLa 492..523 CDD:238060
LDLa 525..559 CDD:238060
LDLa 567..602 CDD:238060
Tryp_SPc 615..852 CDD:238113 72/247 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.