Sequence 1: | XP_011522151.1 | Gene: | LLGL1 / 3996 | HGNCID: | 6628 | Length: | 1105 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001291542.1 | Gene: | Llgl1 / 54265 | RGDID: | 3012 | Length: | 1067 | Species: | Rattus norvegicus |
Alignment Length: | 1091 | Identity: | 945/1091 - (86%) |
---|---|---|---|
Similarity: | 982/1091 - (90%) | Gaps: | 27/1091 - (2%) |
- Green bases have known domain annotations that are detailed below.
Human 1 MMKFRFRRQGADPQREKLKQELFAFNKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVKIYGAPG 65
Human 66 VEFTGLHRDAATVTQMHFLTGQGRLLSLLDDSSLHLWEIVHHNGCAHLEEALSFQLPSRPGFDGA 130
Human 131 SAPLSLTRVTVVLLVAASDIAALGTEGSSVFFLDVTTLTLLEGQTLAPGEVLRSVPDDYRCGKAL 195
Human 196 GPVESLQGHLRDPTKILIGYSRGLLVIWNQASQCVDHIFLGNQQLESLCWGRDSSTVVSSHSDGS 260
Human 261 YAVWSVDAGSFPTLQPTVATTPYGPFPCKAINKILWRNCESGGHFIIFSGGMPRASYGDRHCVSV 325
Human 326 LRAETLVTLDFTSRIIDFFTVHSTRPEDEFDDPQALAVLLEEELVVLDLQTPGWPAVPAPYLAPL 390
Human 391 HSSAITCSAHVASVPAKLWARIVSAGEQQSPQPVSSALSWPITGGRNLAQEPSQRGLLLTGHEDG 455
Human 456 TVRFWDASGVALRPLYKLSTAGLFQTDCEHADSLAQAAEDDWPPFRKVGCFDPYSDDPRLGVQKV 520
Human 521 ALCKYTAQMVVAGTAGQVLVLELSDVPVEQAVSVAIIDLLQDREGFTWKGHERLSPRTGPLPWPA 585
Human 586 GFQPRVLVQCLPPAAVTAVTLHTEWSLVAFGTSHGFGLFDYQRKSPVLARCTLHPNDSLAMEGPL 650
Human 651 SRVKSLKKSLRQSFRRIRKSRVSGKKRAANASSKLQEANAQLAEQACPHDVEMTPVQRRIEPRSA 715
Human 716 DDSLSGVVRCLYFADTFLRDGAHHGPTMWAGTNSGSVFAYALEVPAAAVGGEKRPEQAVEAVLGK 780
Human 781 EVQLMHRAPVVAIAVLDGRGRPLPEPYEASRDLAQAPDMQGGHAVLIASEEQFKVFTLPKVSAKT 845
Human 846 KFKLTAHEGCRVRKVALATFASVACEDYAETCLACLTNLGDVHVFSVPGLRPQVHYSCIRKEDIS 910
Human 911 GIASCVFTRHGQGFYLISPSEFERFSLSARNITEPLCSLDINWPRDATQASYRIRESPKLSQANG 975
Human 976 TPSILLAPQSLDG---SPDPAHSMGPGPQVQRVLRVLVGADDLLPVDTPEPPEAALSPMSIDSAT 1037
Human 1038 SADTTLDTTGDVTVEDVKDFLGKARTIPTSTCPARSWSAGSLAPAWPLNIE 1088 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LLGL1 | XP_011522151.1 | LLGL | 280..379 | CDD:285555 | 92/98 (94%) |
Llgl1 | NP_001291542.1 | WD40 repeat | 38..73 | CDD:293791 | 34/34 (100%) |
WD 1 | 38..71 | 32/32 (100%) | |||
WD 2 | 78..119 | 34/40 (85%) | |||
WD40 repeat | 116..174 | CDD:293791 | 40/58 (69%) | ||
WD 3 | 139..175 | 26/36 (72%) | |||
WD40 repeat | 182..234 | CDD:293791 | 44/51 (86%) | ||
WD 4 | 199..233 | 27/33 (82%) | |||
WD40 repeat | 239..282 | CDD:293791 | 32/42 (76%) | ||
WD 5 | 239..271 | 23/31 (74%) | |||
LLGL | 279..378 | CDD:285555 | 92/98 (94%) | ||
WD 6 | 289..331 | 39/41 (95%) | |||
WD 7 | 339..373 | 29/33 (88%) | |||
WD 8 | 395..473 | 73/77 (95%) | |||
WD 9 | 517..592 | 68/74 (92%) | |||
WD 10 | 601..662 | 58/60 (97%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 669..694 | 22/24 (92%) | |||
WD 11 | 722..782 | 55/59 (93%) | |||
WD 12 | 791..843 | 51/51 (100%) | |||
WD 13 | 848..901 | 50/52 (96%) | |||
WD 14 | 915..938 | 22/22 (100%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C83691808 | |
Domainoid | 1 | 1.000 | 702 | 1.000 | Domainoid score | I3563 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1983 | |
HGNC | 1 | 1.500 | - | - | ||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H31220 | |
Inparanoid | 1 | 1.050 | 1901 | 1.000 | Inparanoid score | I1635 |
NCBI | 1 | 1.000 | - | - | ||
OMA | 1 | 1.010 | - | - | QHG48039 | |
OrthoDB | 1 | 1.010 | - | - | D10661at314146 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000702 | |
OrthoInspector | 1 | 1.000 | - | - | oto138778 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104800 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10241 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X453 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
18 | 18.270 |