DRSC/TRiP Functional Genomics Resources

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Protein Alignment LLGL1 and lgl-1

DIOPT Version :9

Sequence 1:XP_011522151.1 Gene:LLGL1 / 3996 HGNCID:6628 Length:1105 Species:Homo sapiens
Sequence 2:NP_508169.2 Gene:lgl-1 / 180435 WormBaseID:WBGene00018987 Length:941 Species:Caenorhabditis elegans


Alignment Length:988 Identity:212/988 - (21%)
Similarity:408/988 - (41%) Gaps:134/988 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    12 DPQREKLKQELFAFNKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVKIYGAPGVEFT-GLHRDA 75
            :|:...::| ...|::....||.:  ..:|||.....:.||:::|.|..||..|..:| .|.:|:
 Worm    15 EPEEHAIEQ-YAVFDEGNRGGFTS--DVVAFDYHNGCVVIGSKNGEVTFYGYRGASWTVSLSKDS 76

Human    76 ---ATVTQMHFLTGQGRLLSLLDDSSLHLWEIVH-HNGCAHLEEALSFQLPSRPGFDGASAPLSL 136
               |.:..:.|::  ..:..:|.|..|.:  .:| .:|....:|.|.|....:..:|       :
 Worm    77 ENKARIEHIFFIS--SNIALVLCDGQLII--PIHIKDGVITKKEELRFNENHKSKWD-------I 130

Human   137 TRVTVVLLVAASDIAALGTEGSSVFFLDVTTLTLLEGQTLAPGEVL-------RSVPDDYRCGKA 194
            |.|..:    :.|..||      ||.:: .|:..::.:|| ..|||       :.:|||    ..
 Worm   131 THVQKL----SDDTFAL------VFSMN-NTIYRIKSKTL-KSEVLVKAEDFEKWLPDD----TE 179

Human   195 LGPVESLQGHLRDPTKILIGYSRGLLVIWNQASQCVDHIFLGN---QQLESLCWGRDSSTVVS-- 254
            |..:..|.   ..|:.:::....|.:.::|: ||.|....|.|   :.::.|.|..:....|:  
 Worm   180 LASITCLP---EKPSILMLIAENGCVGVFNE-SQFVMKTSLRNYEDEAIQKLHWSSEKKKNVAFG 240

Human   255 SHSDGSYAVWSVDAGSFPTLQP----TVATTPYGPFPCKAIN--KILWRNCESGGHFIIFSGGMP 313
            ...:..|..|....|....:..    ..:...:||:||..|.  .:.....:...:|:|:.||..
 Worm   241 ISCNNKYTKWEFTVGKDCQISAQEVNVYSANQFGPYPCHQIRHFSVCADASDPNENFLIYQGGKS 305

Human   314 RASYGDRHCVSVLRAETLVTLDFTSRIIDFFTVHSTRPEDEFDDPQALAVLL---EEELVVLDLQ 375
            ...|.||..:::...:.:..|:.:|.|:....|..:     ::|.:...|:|   :.|::.:||:
 Worm   306 SGKYDDRDLITISHGDFVEKLELSSEIVGIVGVSGS-----YEDCKKSGVVLICTKCEIIGIDLE 365

Human   376 TPGWPAVPAPYLAPLHSSAITCSAHVASVPAKLWARIVSAGEQQSPQPVSSALSWPITGGRNLA- 439
            ......:...:...:::|..|..:....:...:|.|:.||.:........|...||:...:.:. 
 Worm   366 RESLNMMQPKHFLSINNSTPTTHSRAIEIEENVWNRLESASKSYWETNQMSTRDWPLNFQKKIVT 430

Human   440 ----QEPSQRGLLLTGHEDGTVRFWDASGVALRPLYKLSTAGLFQ--TDCEHADS-LAQAAEDDW 497
                |..|.|.:.|:||.:|.:..|.:.||.:..:..:.|:..|.  :..::.|| ...:.|...
 Worm   431 DANHQRASYRQVYLSGHSNGNICIWSSGGVGMSLMLVIRTSLEFDGASSFDNEDSNYYNSDEKPE 495

Human   498 PPFRKVGCFDPYSDDPRLGVQKVALCKYTAQMVVAGTAGQVLVLELSD----VPVEQAVSVAIID 558
            .|.||:|.:||:.||..:.:.:|.....:..::.....|.||:.||.|    :...:|..::..:
 Worm   496 KPVRKIGLYDPFDDDEEMCITRVHFDPKSGIVIGTNRGGYVLMYELWDSARTLTHWEATPISCNN 560

Human   559 LLQDREGFTWKGHERLSPRTGPLPWPAGFQPRV-------LVQCLPPA-AVTAVTLHTEWSLVAF 615
            ...|..      ...|.||...|.:.||:|.|:       ||..:.|: .:|.:....::..:|.
 Worm   561 SPPDTR------KRALKPRKAELKYNAGYQIRLKNESDLPLVFSMHPSHRITDIVYLHKYHCLAV 619

Human   616 GTSHGFGLFDYQRKSPVLARCTLHPND--SLAMEGPLSRVKSLKKSLRQSFRRIRKSRVSGKKRA 678
            |::.|..:.|......|.|......|:  |........|.||||||||::|||.:|    |.:..
 Worm   620 GSNFGIVMLDVNFGYLVYANSFNDDNNDSSNVSANQFQRFKSLKKSLRKTFRRKKK----GTETL 680

Human   679 ANASSKLQEANAQLAEQACPHDV-----EMTPVQRRIEPRS--------ADDSLSGVVRCLYFAD 730
            .::...:..::..:..:..|..:     |...::|.||.|.        |::| .|.|.||....
 Worm   681 MDSGGAVASSSNHVQHETSPKRIDDFEEEEVFMERPIEAREELGVLDCYAENS-KGTVTCLRMMR 744

Human   731 TFLRDGAHHGPTMWAGTNSGSVFAYALEVPAAAVGGEKRPEQAVEAVLGKEVQLMHRAPVVAIAV 795
            ..:.|..:....:..|.:.|||:.||:......:....:.||.      |::.:.|:.|||.:.:
 Worm   745 FPVLDDKNVDDIIAVGLHEGSVYFYAISEHDVGLRMTFKAEQI------KKLSIPHKQPVVNLDI 803

Human   796 LDGRGRPLPEPYEASRDLAQAPDMQGGHAVLIASEEQFKVFTLPKVSAKTKFKLTAHEGCRVRKV 860
            .:..|.     :.||.            .:::.:|||.:::....:..:..:|:||.||.:::..
 Worm   804 TNEEGY-----FSAST------------RIVVITEEQLRIYNCQPMVKRDSYKITALEGLKIKNG 851

Human   861 ALATFASVACEDYAETCLACLTNLGDVHVFSVPGLRPQVHYSCIRKEDISGIASCVFTRHGQGFY 925
            .:|...:....:..|:.:..:.|.|.:.|.||...........|...|:..:.|...:|.|...:
 Worm   852 MVARILNKKNSNNFESFVVLVANDGSLRVHSVQKASSFESRKFIDPIDVMALNSSCLSRDGDVAF 916

Human   926 LISPSEFERFSLS 938
            ||..||.:|.:::
 Worm   917 LIKSSELQRSTVN 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LLGL1XP_011522151.1 LLGL 280..379 CDD:285555 22/103 (21%)
lgl-1NP_508169.2 LLGL 273..364 CDD:369834 20/95 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161470425
Domainoid 1 1.000 99 1.000 Domainoid score I4899
eggNOG 1 0.900 - - E1_KOG1983
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.928771 Normalized mean entropy S6106
OMA 1 1.010 - - QHG48039
OrthoDB 1 1.010 - - D113391at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10241
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.770

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