DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LLGL1 and llgl1

DIOPT Version :9

Sequence 1:XP_011522151.1 Gene:LLGL1 / 3996 HGNCID:6628 Length:1105 Species:Homo sapiens
Sequence 2:XP_002935892.2 Gene:llgl1 / 100486472 XenbaseID:XB-GENE-868457 Length:1052 Species:Xenopus tropicalis


Alignment Length:1066 Identity:746/1066 - (69%)
Similarity:875/1066 - (82%) Gaps:45/1066 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MMKFRFRRQGADPQREKLKQELFAFNKTVEHGFPNQPSALAFDPELRIMAIGTRSGAVKIYGAPG 65
            ||||||||||.||||||:||||||||||||||||||||:|||||.|||||||.:|||||||||||
 Frog     1 MMKFRFRRQGHDPQREKIKQELFAFNKTVEHGFPNQPSSLAFDPLLRIMAIGAKSGAVKIYGAPG 65

Human    66 VEFTGLHRDAATVTQMHFLTGQGRLLSLLDDSSLHLWEIVHHNGCAHLEEALSFQLPSRPGFDGA 130
            |||||||:|.|||||||||.|||||||||||:::||||:...:|.:||||..||.||.:||||.|
 Frog    66 VEFTGLHKDTATVTQMHFLPGQGRLLSLLDDNTMHLWELQQKDGSSHLEETRSFLLPGKPGFDCA 130

Human   131 SAPLSLTRVTVVLLVAASDIAALGTEGSSVFFLDVTTLTLLEGQTLAPGEVLRSVPDDYRCGKAL 195
            ::|.|.|||||:|:.|:.::|.|||||..|:|:.:.:|.|||.:||...|:::|:|::|||||.|
 Frog   131 NSPPSFTRVTVILITASCEVAGLGTEGGGVYFIQIPSLKLLEEKTLLQDEIVKSLPEEYRCGKTL 195

Human   196 GPVESLQGHLRDPTKILIGYSRGLLVIWNQASQCVDHIFLGNQQLESLCWGRDSSTVVSSHSDGS 260
            |||||||.|......|||||||||:|:|:|..:.|:|:|||||||||:.|||..::.:||||||.
 Frog   196 GPVESLQEHPCQRGTILIGYSRGLVVLWDQEGRKVEHLFLGNQQLESVFWGRKGTSFISSHSDGG 260

Human   261 YAVWSVDAGSFPTLQPTVATTPYGPFPCKAINKILWRNCESGGHFIIFSGGMPRASYGDRHCVSV 325
            |.||...:.|..|.||..:..|||||||||||||.||:..||..:||||||||||||||||||::
 Frog   261 YMVWEAASDSSTTSQPVTSKIPYGPFPCKAINKIQWRSSSSGNPYIIFSGGMPRASYGDRHCVTI 325

Human   326 LRAETLVTLDFTSRIIDFFTVHSTRPEDEFDDPQALAVLLEEELVVLDLQTPGWPAVPAPYLAPL 390
            |:.:.|||||||||::|||||...:.||:.|:|.||.||:||||||:||||||||.||.||||||
 Frog   326 LQGQNLVTLDFTSRVVDFFTVCPLKSEDDSDNPTALVVLVEEELVVIDLQTPGWPTVPTPYLAPL 390

Human   391 HSSAITCSAHVASVPAKLWARIVSAGEQQSPQPVSSALSWPITGGRNLAQEPSQRGLLLTGHEDG 455
            |||||||:.|:::|..|||.||:||||||:||  .|:::|||.||||||:||:||||||||||||
 Frog   391 HSSAITCAYHISNVTTKLWERIISAGEQQNPQ--FSSVNWPIDGGRNLAEEPAQRGLLLTGHEDG 453

Human   456 TVRFWDASGVALRPLYKLSTAGLFQTDCEHADSLAQAAEDDWPPFRKVGCFDPYSDDPRLGVQKV 520
            ||||||||||||||||||||||:|||||:|.:|..|:.:::||||||||||||||||||||:||:
 Frog   454 TVRFWDASGVALRPLYKLSTAGIFQTDCDHNESFNQSNDEEWPPFRKVGCFDPYSDDPRLGIQKI 518

Human   521 ALCKYTAQMVVAGTAGQVLVLELSDVPVEQAVSVAIIDLLQDREGFTWKGHERLSPRTGPLPWPA 585
            |||||:.:|:||||||||||::|:|..||..::||.:||||:|||||||||:||:||.|.|.:..
 Frog   519 ALCKYSGKMLVAGTAGQVLVMDLNDEKVEHTINVATVDLLQEREGFTWKGHDRLTPRNGSLFFQP 583

Human   586 GFQPRVLVQCLPPAAVTAVTLHTEWSLVAFGTSHGFGLFDYQRKSPVLARCTLHPNDSLAMEGPL 650
            |||...||||:||||||||.||:||:|||||||||||||||.|:|||||||||||||||||||||
 Frog   584 GFQTITLVQCMPPAAVTAVALHSEWNLVAFGTSHGFGLFDYHRRSPVLARCTLHPNDSLAMEGPL 648

Human   651 SRVKSLKKSLRQSFRRIRKSRVSGKKRAANAS--SKLQEANAQLAEQACPHDVEMTPVQRRIEPR 713
            |||||||||||||||||||||||||||....|  |:||||||||||||.|||:::.|||||||||
 Frog   649 SRVKSLKKSLRQSFRRIRKSRVSGKKRPNTGSPPSRLQEANAQLAEQAGPHDLDIAPVQRRIEPR 713

Human   714 SADDSLSGVVRCLYFADTFLRDGAHHGPTMWAGTNSGSVFAYALEVPAAAVGGEKRPEQAVEAVL 778
            ||||||||||||||||||||||..|||||||||||||||||||||||:.    ||..:::.||||
 Frog   714 SADDSLSGVVRCLYFADTFLRDAIHHGPTMWAGTNSGSVFAYALEVPSR----EKLSDRSAEAVL 774

Human   779 GKEVQLMHRAPVVAIAVLDGRGRPLPEPYEASRDLAQAPDMQGGHAVLIASEEQFKVFTLPKVSA 843
            |||:|||||||||:||||||||.|||||:|.|:|||:||||||.|:|||:|||||||||||||||
 Frog   775 GKEIQLMHRAPVVSIAVLDGRGNPLPEPFEVSQDLAKAPDMQGTHSVLISSEEQFKVFTLPKVSA 839

Human   844 KTKFKLTAHEGCRVRKVALATFASVACEDYAETCLACLTNLGDVHVFSVPGLRPQVHYSCIRKED 908
            ||||||||||||||||||||||.|...:||:|.||||||||||:|||:||||||||.|.||||||
 Frog   840 KTKFKLTAHEGCRVRKVALATFTSATSDDYSENCLACLTNLGDIHVFTVPGLRPQVRYDCIRKED 904

Human   909 ISGIASCVFTRHGQGFYLISPSEFERFSLSARNITEPLCSLDINWPRDATQASYRIRESPKLSQA 973
            ||||||||||::|||||||||||||||||||:|||||:|.::.:.|.|....|.::..|||.:||
 Frog   905 ISGIASCVFTKYGQGFYLISPSEFERFSLSAKNITEPVCLVEFDRPHDPLHFSNKMTPSPKGNQA 969

Human   974 NGTPSIL----LAPQSLDGSPDPAHSMGPGPQVQRVLRVLVGADDLLPVDTPEPPEAALSPMSID 1034
            ||| .||    .:.|:.:|:                     |.:.:          |..||..:|
 Frog   970 NGT-HILRDSEASQQATEGN---------------------GCERM----------AEFSPSPLD 1002

Human  1035 S-ATSADTTLDTTGDVTVEDVKDFLG 1059
            | ..|.|||||||||:|||||:|.||
 Frog  1003 SPMNSMDTTLDTTGDITVEDVRDILG 1028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LLGL1XP_011522151.1 LLGL 280..379 CDD:285555 69/98 (70%)
llgl1XP_002935892.2 WD40 repeat 37..69 CDD:293791 27/31 (87%)
WD40 repeat 78..116 CDD:293791 26/37 (70%)
LLGL 279..379 CDD:400597 69/99 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 875 1.000 Domainoid score I974
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H31220
Inparanoid 1 1.050 1540 1.000 Inparanoid score I1328
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D113391at33208
OrthoFinder 1 1.000 - - FOG0000702
OrthoInspector 1 1.000 - - oto155447
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X453
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.060

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