DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon74E and st14a

DIOPT Version :9

Sequence 1:NP_001189126.2 Gene:Jon74E / 39959 FlyBaseID:FBgn0023197 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001035441.2 Gene:st14a / 678603 ZFINID:ZDB-GENE-030131-6496 Length:834 Species:Danio rerio


Alignment Length:256 Identity:79/256 - (30%)
Similarity:119/256 - (46%) Gaps:35/256 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RIAGGELARANQFPYQVGLSIEEPNDMYCWCGASLISDRYLLTAAHCVEKAVAITYYLGGVLRL- 94
            ||.||:.|...:||:||.|.|:....:   ||.|:|::|:::||||||:..|.|.|...|...: 
Zfish   596 RIVGGQDAFEGEFPWQVSLHIKNIAHV---CGGSIINERWIVTAAHCVQDDVKIKYSQPGTWEVF 657

  Fly    95 -----------APRQLIRSTNPEVHLHPDWNCQSLENDIALVRLPEDALLCDSIRPIRLPGLSSS 148
                       |.::|::...|    ||.:|..:.:|||||:.:.......|:|||:.||     
Zfish   658 LGLHSQKDKLTATKRLLKQVIP----HPYYNAYTYDNDIALMEMESPVTFSDTIRPVCLP----- 713

  Fly   149 RNSYDYVPA----IASGWGRMNDESTAISDNLRYVYRFVESNEDCEYSYANIKPTNICMDT-TGG 208
             .:.|..||    ..||||...:..:..:...:...|.:.|....:.....|.....|... :||
Zfish   714 -TATDTFPAGTSVFISGWGATREGGSGATVLQKAEVRIINSTVCNQLMGGQITSRMTCAGVLSGG 777

  Fly   209 KSTCTGDSGGPLVYSDPVQNADILIGVTSYGKKSGCT-KGYPSVFTRITAYLDWIGEVSGV 268
            ...|.|||||||  |.|......|.||.|:|  .||. :..|.:::.:..:..||.|.:||
Zfish   778 VDACQGDSGGPL--SFPSGKRMFLAGVVSWG--DGCARRNKPGIYSNVPKFRAWIKEKTGV 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon74ENP_001189126.2 Tryp_SPc 31..262 CDD:214473 74/248 (30%)
st14aNP_001035441.2 SEA 77..168 CDD:279699
CUB 219..322 CDD:238001
CUB 329..431 CDD:238001
LDLa 443..472 CDD:238060
LDLa 474..508 CDD:238060
LDLa 510..544 CDD:238060
LDLa 550..585 CDD:238060
Tryp_SPc 596..828 CDD:214473 74/248 (30%)
Tryp_SPc 597..831 CDD:238113 75/250 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433637at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.