DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon74E and c1s

DIOPT Version :9

Sequence 1:NP_001189126.2 Gene:Jon74E / 39959 FlyBaseID:FBgn0023197 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_002941253.2 Gene:c1s / 613055 XenbaseID:XB-GENE-995410 Length:691 Species:Xenopus tropicalis


Alignment Length:253 Identity:86/253 - (33%)
Similarity:132/253 - (52%) Gaps:34/253 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GRIAGGELARANQFPYQVGLSIEEPNDMYCWCGASLISDRYLLTAAHCVEKAVAITYYLGGVLRL 94
            |||.||..|:..|||:.:..:..|..      |.||||||::|||||.|.|.:..|.: |||::.
 Frog   435 GRIFGGTRAKPGQFPWMIQFTDIELG------GGSLISDRWVLTAAHVVNKKIFPTMF-GGVMKF 492

  Fly    95 APRQLIRSTN-----PEVHLHP------DWNCQS-LENDIALVRLPEDALLCDSIRPIRLP--GL 145
            .|...::|..     .::.:||      |...|| .:||||||:|.:...|...|.||.||  ||
 Frog   493 FPNTNLQSQEKRLQAKKIIIHPLYQDNEDTEGQSNFDNDIALVQLTKKVKLGSCISPICLPRRGL 557

  Fly   146 SSSRNSYDYVPAIASGWGRMNDESTAISDNLRYVYRFVESNEDCEYSYAN---IKPTNICMDTTG 207
            :...|..    |..:|||:.....:|:  ||::....:.|.:.|:.:...   ..|..:|..:..
 Frog   558 APVVNEV----ATIAGWGKTEKRESAV--NLQFASISLSSMDKCKKATGGKGYFTPNMLCAGSDV 616

  Fly   208 GKSTCTGDSGGPLVYSDPVQNADI-LIGVTSYGKKSGCTKGYPSVFTRITAYLDWIGE 264
            ||.:|.|||||||:::||..::.: :.|:.|:|.:...|.|   ::|::..|||||.|
 Frog   617 GKDSCNGDSGGPLMFTDPQDSSKMYMAGIVSWGPRDCGTYG---LYTKVDNYLDWIEE 671

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Jon74ENP_001189126.2 Tryp_SPc 31..262 CDD:214473 82/248 (33%)
c1sXP_002941253.2 CUB 21..131 CDD:238001
FXa_inhibition 145..173 CDD:405372
CUB 177..288 CDD:238001