DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon74E and grass

DIOPT Version :10

Sequence 1:NP_001189126.2 Gene:Jon74E / 39959 FlyBaseID:FBgn0023197 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:265 Identity:66/265 - (24%)
Similarity:113/265 - (42%) Gaps:31/265 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DMGHGIGGRIAGGELARANQFPYQVGLSIEEPNDMYCWCGASLISDRYLLTAAHCVEKAVAITYY 87
            |.|:.:..|::.|...:.:..|:...|..::..:....||.::||:||:|||||||.......|.
  Fly   110 DCGNFLSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYE 174

  Fly    88 L----------------GGVLRLAPRQLIRSTNPEVHL-HPDWNCQSLENDIALVRLPEDALLCD 135
            :                |...:.||.  :.:...|.|| |..::.:.:.:||||::|........
  Fly   175 IRLGEHRISTEEDCRQQGRKKKCAPP--VVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQK 237

  Fly   136 SIRPIRLPGLSSSRNSYDYVPA-IASGWGRMNDESTAISDNLRYVYRFVESNEDCEYSYANIKP- 198
            .|:||.||.....:...:.:.. ..:|||  ..|:.:.||.|......::....|..:|....| 
  Fly   238 HIKPICLPITDELKEKAEQISTYFVTGWG--TTENGSSSDVLLQANVPLQPRSACSQAYRRAVPL 300

  Fly   199 TNICMDTTGGKSTCTGDSGGPLVYSDPVQNAD------ILIGVTSYGKKSGCTKGYPSVFTRITA 257
            :.:|:.....:.:|.|||||||  ..|.|...      :..|:.|.|..:......|.::|.:..
  Fly   301 SQLCVGGGDLQDSCKGDSGGPL--QAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGE 363

  Fly   258 YLDWI 262
            |:.||
  Fly   364 YVQWI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon74ENP_001189126.2 Tryp_SPc 31..262 CDD:214473 62/255 (24%)
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 63/254 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.