DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon74E and Tmprss4

DIOPT Version :10

Sequence 1:NP_001189126.2 Gene:Jon74E / 39959 FlyBaseID:FBgn0023197 Length:271 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:264 Identity:88/264 - (33%)
Similarity:125/264 - (47%) Gaps:37/264 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SISCLDMGHGI-GGRIAGGELARANQFPYQVGLSIEEPNDMYCWCGASLISDRYLLTAAHCVEKA 81
            |:.|||.|..: ..|:.||..|.|:.:|:||.:...:.:    .||.|::...::||||||..|.
  Rat   231 SLRCLDCGKSLKTTRVVGGVEASADSWPWQVSIQYNKQH----VCGGSILDHHWILTAAHCFRKY 291

  Fly    82 VAITYY--------LGGVLRLAPRQL-IRSTNPEVHLHPDWNCQSLENDIALVRLPEDALLCDSI 137
            :.::.:        ||....|...:: |...||         .|..|.|||||:|........|:
  Rat   292 LDVSSWKVRAGSNKLGNSPSLPVAKIFIAEPNP---------LQPKEKDIALVKLKMPLTFSGSV 347

  Fly   138 RPIRLPGLSSSRNSYDYVPAIASGWGRMNDESTAISDNLRYVYRFVESNEDC--EYSY-ANIKPT 199
            |||.||  .|.......:|....|||...:....:||.|......|..:..|  |.:| ..:...
  Rat   348 RPICLP--FSDEELIPTMPVWVIGWGFTEENGGKMSDTLLQASVQVIDSARCNAEDAYQGEVTAG 410

  Fly   200 NICMDT-TGGKSTCTGDSGGPLVYS-DPVQNADILIGVTSYGKKSGC-TKGYPSVFTRITAYLDW 261
            .:|..| .|||.||.|||||||:|. |..|    ::|:.|:|  .|| :...|.|:|::||||||
  Rat   411 MLCAGTPQGGKDTCQGDSGGPLMYHYDKWQ----VVGIVSWG--YGCGSPSTPGVYTKVTAYLDW 469

  Fly   262 IGEV 265
            |..|
  Rat   470 IYNV 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon74ENP_001189126.2 Tryp_SPc 31..262 CDD:214473 80/245 (33%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597 4/6 (67%)
Tryp_SPc 245..470 CDD:214473 80/245 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.