DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon74E and F12

DIOPT Version :10

Sequence 1:NP_001189126.2 Gene:Jon74E / 39959 FlyBaseID:FBgn0023197 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001014028.1 Gene:F12 / 306761 RGDID:1359175 Length:603 Species:Rattus norvegicus


Alignment Length:264 Identity:80/264 - (30%)
Similarity:115/264 - (43%) Gaps:55/264 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RIAGGELARANQFPYQVGLSIEEPNDMYCW----CGASLISDRYLLTAAHCVEKAVAITYYLGGV 91
            |:.||.:|.....||...|         .|    |..|||...::||||||::|           
  Rat   361 RVVGGLVALPGSHPYIAAL---------YWGDSFCAGSLIDPCWVLTAAHCLQK----------- 405

  Fly    92 LRLAPRQLI-------------RSTNPEVH---LHPDWNCQSLENDIALVRL----PEDALLCDS 136
             |.||.:|.             |.....||   ||..::.::.::|:||:||    ...|:|...
  Rat   406 -RPAPEELTVVLGQDRHNQSCERCQTLAVHSYRLHEGFSSKTYQHDLALLRLRGRKNSCAILSPH 469

  Fly   137 IRPIRLPGLSSSRNSYDYVPAIASGWGRMNDESTAISDNLRYVYRFVESNEDCEYSYAN---IKP 198
            ::|:.||  ||:....:.|....:|||...:.:...:..|:.......|.:.|..|..:   |.|
  Rat   470 VQPVCLP--SSAAPPSETVLCEVAGWGHQFEGAEEYATFLQEAQVPFISLDRCSSSNVHGDAILP 532

  Fly   199 TNICMD-TTGGKSTCTGDSGGPLVYSDPVQNADI-LIGVTSYGKKSGC-TKGYPSVFTRITAYLD 260
            ..:|.. ..||...|.||||||||..:.|....: |.||.|:|  ||| .:..|.|:|.:..|||
  Rat   533 GMLCAGFLEGGADACQGDSGGPLVCDEGVTERQLTLRGVISWG--SGCGDRNKPGVYTDVANYLD 595

  Fly   261 WIGE 264
            ||.|
  Rat   596 WIQE 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon74ENP_001189126.2 Tryp_SPc 31..262 CDD:214473 77/260 (30%)
F12NP_001014028.1 FN2 40..87 CDD:238019
EGF_CA 95..130 CDD:238011
FN1 132..170 CDD:238018
EGF 177..207 CDD:394967
Kringle 216..294 CDD:395005
Tryp_SPc 362..600 CDD:238113 79/263 (30%)
Blue background indicates that the domain is not in the aligned region.

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