DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon74E and gzm3.4

DIOPT Version :10

Sequence 1:NP_001189126.2 Gene:Jon74E / 39959 FlyBaseID:FBgn0023197 Length:271 Species:Drosophila melanogaster
Sequence 2:NP_001108167.1 Gene:gzm3.4 / 100001210 ZFINID:ZDB-GENE-070912-136 Length:251 Species:Danio rerio


Alignment Length:276 Identity:78/276 - (28%)
Similarity:124/276 - (44%) Gaps:44/276 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQISTILVFLLILVQGRSISCLDMGHGIGGRIAGGELARANQFPYQVGLSIEEPNDMYCWCGASL 65
            |..:.|.:.|:      |.|.:..| |:...|.||...:.:..||...|.::..::    ||..|
Zfish     1 MYYNNICIILI------SYSVIKTG-GMESGIVGGREVKLHSRPYMASLQVQRKHN----CGGIL 54

  Fly    66 ISDRYLLTAAHCVEKAVAITYYLGG---VLRLAPRQLIRSTNPEVHLHPDWNCQSLENDIALVRL 127
            |.:.|:||:|||.:....:...||.   ..|...:|:|:.  .:...||::..::...||.|::|
Zfish    55 IKEDYVLTSAHCWKDTTNLEVVLGAHNISQRENSQQIIQV--QKYIKHPNYQKKNHSFDIMLLKL 117

  Fly   128 PEDALLCDSIRPIRLPGLSSSRNSYDYVPAI-------ASGWGRMNDESTAISDNLRYVYRFVES 185
            ...|:|...:....||         .:.|:|       .:||| |.......|:.||.|...:||
Zfish   118 KTKAVLNHFVNITNLP---------KHEPSILAPVECSIAGWG-MQRPGEGASNVLREVNLQLES 172

  Fly   186 NEDCEYS---YANIKPTNICMDTTGGKSTCTGDSGGPLVYSDPVQNADILIGVTSYGKKSGCT-K 246
            |..|:..   |.|.| ..:|..:.|.|:.|.||||.||..:..      |.|:.:|...:.|| |
Zfish   173 NSYCKSKWQVYFNSK-NMVCTASDGKKAFCQGDSGSPLFCNSE------LYGMAAYTYPNNCTFK 230

  Fly   247 GYPSVFTRITAYLDWI 262
            .||.|:.:::|:|.||
Zfish   231 EYPEVYMKVSAFLPWI 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon74ENP_001189126.2 Tryp_SPc 31..262 CDD:214473 69/244 (28%)
gzm3.4NP_001108167.1 Tryp_SPc 25..249 CDD:238113 71/245 (29%)

Return to query results.
Submit another query.