DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nedd4 and itch

DIOPT Version :10

Sequence 1:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster
Sequence 2:NP_001072737.1 Gene:itch / 780194 XenbaseID:XB-GENE-976485 Length:853 Species:Xenopus tropicalis


Alignment Length:1062 Identity:344/1062 - (32%)
Similarity:467/1062 - (43%) Gaps:323/1062 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GNGYTPRRSLAAVNDSGDSCHLRIVVLTGQ-SLAKKDIFGASDPYVRIDLNTINGDINIDSVLTK 114
            |:|..|    .|||.......|:::|::.: ...:|:.||.| |||.:   :::|    .|..|:
 Frog     3 GSGSRP----GAVNGFTMKSQLQVIVISAKLKDNRKNWFGPS-PYVEL---SVDG----QSKKTE 55

  Fly   115 TKKKTLNPTWNEEFIFRVKPSEHKLVFQVFDENRLTRDDFLGMVELTL---------------VN 164
            ||.||.:|.|.:.....|.|.. .|.|:|:....|..|..:|...|.|               |.
 Frog    56 TKNKTHSPKWKQPLTVIVTPFS-VLNFRVWSHQTLKSDALIGSASLNLHETLLSNNMKLEEVIVT 119

  Fly   165 LPTEQEGRTIGEQSYTL-------------RPRRSVGAKSRIKGTLRIYHAFI-----------R 205
            :....:..|:|:.|..|             .|..|.|:.......:....|..           |
 Frog   120 MQLLSDRETVGDLSVCLDGMQVDPELLANGDPAVSSGSTDNSSTEVESQAASAESSNGTNSTDSR 184

  Fly   206 ETREQSEPSSGNSDGEWEHVEATNAGETSAQPHPFP-------TGGHDA---------------- 247
            .|...|.||..|..     .:|:.....|..|.|.|       |...:|                
 Frog   185 TTNGMSSPSLANGG-----FKASRPPRPSRPPPPTPRRASGVVTAISEAPPPPEAELLPTPATAS 244

  Fly   248 ----------------------------------LPAGWEERQDANGRTYYVNHTARTTQWDRPT 278
                                              ||.|||:|.|..||.|||:|.|:.|.|||| 
 Frog   245 LPEAQAPSSTPPVSRQIAPINVDGQRMGLVNQGPLPPGWEQRVDQQGRVYYVDHVAKRTTWDRP- 308

  Fly   279 VLNSHSSQSTDDQLASDFQRRFHISVDDTESGRSADSISHNSIEDNNNAAGLAYTPKTAATSSAP 343
                       :.|...::||    ||                    |...:.|           
 Frog   309 -----------EPLPPGWERR----VD--------------------NMGRIYY----------- 327

  Fly   344 PNTPTNNNGILAQIAMQYRAEEDQDPTVDHTSFVYNSLRHPVAHRQPEISATSLQNDLRPVREAP 408
                                       |||                                   
 Frog   328 ---------------------------VDH----------------------------------- 330

  Fly   409 GVPDIAITNPFTRRAAGNMAGGAGWQQ---ERRRQQMQLHIQQHQQRQQQQQQNRILLDVDHRQQ 470
                  ||...|            ||:   |..|...|..:|::|.:...||.|:..:   :..|
 Frog   331 ------ITRTTT------------WQRPTLESVRNYEQWQLQRNQLQGAMQQFNQRFI---YGTQ 374

  Fly   471 EPQHRGQRHQQQHRPSNEDTDHTDSHNPSDISAPSTRRNSEEDNAAVPPMEQNTGGEEEPLPPRW 535
            |                                ..|.:|.|.|     |:        .|||..|
 Frog   375 E--------------------------------TGTTQNKEYD-----PL--------GPLPVGW 394

  Fly   536 SMQVAPNGRTFFIDHASRRTTWIDPRN-GRASPMPNQTRRVEDDLGPLPEGWEERVHTDGRVFYI 599
            ..::..|||.:|::|.:|.|.|.|||| |:.:..            |||||||.|...||..:::
 Frog   395 EKRMDGNGRVYFVNHTTRTTQWEDPRNQGQLNEK------------PLPEGWEMRFTVDGIPYFV 447

  Fly   600 DHNTRTTQWEDPR-----LSN-PNIAGQAVPYSRDYKQKYEYFKSHIRKPTNVPNKFEIRIRRTS 658
            |||.:||.:.|||     |.| |:||     |.||:|.|.:||:...:: ..:|...:|.:.|.:
 Frog   448 DHNRKTTTYIDPRTGKSALDNGPHIA-----YVRDFKAKVQYFRFWCQQ-LYMPQHVKITVNRKT 506

  Fly   659 ILEDSYRIISSVTKTDLLKTKLWVEFEGETGLDYGGLAREWFYLLSKEMFNPYYGLFEYSAMDNY 723
            :.|||::.|.|....| |:.:||:...||.||||||:|||||:|||.|:.||.|.||||:..|||
 Frog   507 LFEDSFQQIMSFNAQD-LRRRLWIIIPGEEGLDYGGVAREWFFLLSHEVMNPMYCLFEYAGKDNY 570

  Fly   724 TLQINNGSGLCNEEHLSYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEY 788
            .||||..|.: |.:||.||:||||...||::|||.:|..|..||||.:|.||:.|||:||||.|:
 Frog   571 CLQINPASYI-NPDHLRYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESVDPEF 634

  Fly   789 YNSLMWIKENDPRI--LELTFCLDEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVAR 851
            ||||:|||:|:...  ||:.|.:|:::.|....|:|||.|:||.||.|||:|||:||.|||....
 Frog   635 YNSLIWIKDNNIEECGLEMFFSVDKEILGDVKSHDLKPDGSNIQVTEENKEEYIRLVAEWRLSRG 699

  Fly   852 VKEQMSSFLDGFGSIIPLNLIKIFDEHELELLMCGIQNIDVKDWRENTLYKGDYHMNHIIIQWFW 916
            |:||..:|.:||..|:|...::.||..|||:|:||:|.||:.||:.||:|: .|......|.|||
 Frog   700 VEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRNTIYR-HYTRTSKQIIWFW 763

  Fly   917 RAVLSFSNEMRSRLLQFVTGTSRVPMNGFKELYGSNGPQMFTIEKWGTPNNFPRAHTCFNRLDLP 981
            :.|....||.|.|||||||||.|:|:.||.:|.||||||.|.|||.|..|..||:||||||||||
 Frog   764 QFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLP 828

  Fly   982 PYEGYLQLKDKLIKAIEGSQGF 1003
            ||:.|.|||:||:.|||.::||
 Frog   829 PYKSYEQLKEKLLFAIEETEGF 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999 37/161 (23%)
WW 248..277 CDD:459800 17/28 (61%)
HUL4 <523..1003 CDD:227354 237/488 (49%)
itchNP_001072737.1 C2_E3_ubiquitin_ligase 17..137 CDD:175988 32/128 (25%)
WW 279..308 CDD:459800 17/28 (61%)
HUL4 <310..853 CDD:227354 269/725 (37%)

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