DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nedd4 and UBE3A

DIOPT Version :9

Sequence 1:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster
Sequence 2:NP_000453.2 Gene:UBE3A / 7337 HGNCID:12496 Length:875 Species:Homo sapiens


Alignment Length:554 Identity:156/554 - (28%)
Similarity:248/554 - (44%) Gaps:109/554 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 DTDHT--DSHNPSDISAPST--------RRNSEEDNAAVPPMEQNTGGE---------------E 528
            ||:|.  |...|...|:..|        |||.:  ...|.|:|...|.:               .
Human   389 DTNHNEEDDEEPIPESSELTLQELLGEERRNKK--GPRVDPLETELGVKTLDCRKPLIPFEEFIN 451

  Fly   529 EPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGRASPMPNQTRRVEDDLGPLPEGWEERVHTD 593
            |||.....|.   ...|||......:.:::        ..|.....|..:||             
Human   452 EPLNEVLEMD---KDYTFFKVETENKFSFM--------TCPFILNAVTKNLG------------- 492

  Fly   594 GRVFYIDHNTRTTQWEDPRLS--NPNIAGQAV-PYSRDYKQKYEYFKSHIRKPTNVPNKFEIRIR 655
               .|.|:..|  .:.:.|::  ...:.||.: ||.|                        :::|
Human   493 ---LYYDNRIR--MYSERRITVLYSLVQGQQLNPYLR------------------------LKVR 528

  Fly   656 RTSILEDS---YRIISSVTKTDLLKTKLWVEFEGETGLDYGGLAREWFYLLSKEMFNPYYGLFEY 717
            |..|::|:   ..:|:.....| ||.:|:||||||.|:|.||:::|:|.|:.:|:|||..|:|.|
Human   529 RDHIIDDALVRLEMIAMENPAD-LKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTY 592

  Fly   718 SAMDNYTLQINNGSGLCNEEHLSYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDME 782
            .  ::..|...|.|....|   ..|..||.:.|:|:|:..:||..|....|:.::.|....:|:.
Human   593 D--ESTKLFWFNPSSFETE---GQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLG 652

  Fly   783 SVDTEYYNSLMWIKENDPRI---LELTFCLDE-DVFGQKSQHELKPGGANIDVTNENKDEYIKLV 843
            ......|.||..:.|.:..:   :.:||.:.: |:||....::||..|..|.:||||:.|::.|.
Human   653 DSHPVLYQSLKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFVNLY 717

  Fly   844 IEWRFVARVKEQMSSFLDGFGSIIPLNLIK-IFDEHELELLMCGIQNIDVKDWRENTLYKGDYHM 907
            .::.....|::|..:|..||..:...:.:| :|...|:|||:||.:|:|.:...|.|.|.|.|..
Human   718 SDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYTR 782

  Fly   908 NHIIIQWFWRAVLSFSNEMRSRLLQFVTGTSRVPMNG---FKELYGSNGPQMFTIEKWGTPNNFP 969
            :.::|:.||..|.||::|.:...|||.|||.|.|:.|   .|.:...|||.         ....|
Human   783 DSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGPD---------TERLP 838

  Fly   970 RAHTCFNRLDLPPYEGYLQLKDKLIKAIEGSQGF 1003
            .:|||||.|.||.|....:||::|:|||..::||
Human   839 TSHTCFNVLLLPEYSSKEKLKERLLKAITYAKGF 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999
WW 248..277 CDD:278809
WW 531..560 CDD:278809 5/28 (18%)
WW 581..613 CDD:197736 3/31 (10%)
HECTc 650..1003 CDD:238033 120/363 (33%)
HECTc 674..1003 CDD:214523 115/336 (34%)
UBE3ANP_000453.2 AZUL 29..83 CDD:406862
HECTc 523..873 CDD:238033 123/389 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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