DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nedd4 and kibra

DIOPT Version :9

Sequence 1:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster
Sequence 2:NP_001034055.1 Gene:kibra / 41783 FlyBaseID:FBgn0262127 Length:1288 Species:Drosophila melanogaster


Alignment Length:616 Identity:143/616 - (23%)
Similarity:220/616 - (35%) Gaps:217/616 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   436 ERRRQQMQLHIQQHQQRQQQQQQNRILLDVDHRQQEPQHRGQRHQQQHRPSNEDTDHTDSHNPSD 500
            ::...|.|.|:..|..|.|||||..    ..|.||:.|.:...||||.:      .|:|.     
  Fly     5 QQTASQSQHHLHPHHLRPQQQQQQH----HHHHQQQQQQQHTHHQQQQQ------HHSDF----- 54

  Fly   501 ISAPSTRRNSEEDNAAVPPMEQNTGGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGRA 565
                                         |||..|.:....:|:|::|||.:::|||:|||:...
  Fly    55 -----------------------------PLPDGWDIAKDFDGKTYYIDHINKKTTWLDPRDCYT 90

  Fly   566 SPMPNQTRRVEDDLG-PLPEGWEERVHTDGRVFYIDHNTRTTQWEDPRLSNPNIAGQAVPYSRDY 629
            .|   ||  .||.:| .||.||||....:...:||:|..::||.||||.....:..|.:   .||
  Fly    91 KP---QT--FEDCVGDELPMGWEESYDPNIGPYYINHLAQSTQLEDPRQEWKTVQEQML---SDY 147

  Fly   630 --------KQKYEYF---KSHIRKPTNVPNKFEIRIRRTSILEDSYRIISSVTKTD--LLKTKLW 681
                    :.|.|.|   :..:.......|..::...|:|:...|    ||:::.|  ||:..|.
  Fly   148 LSAAQDQLENKREMFDVKQQRLLWAQEEYNHLKLAASRSSLCSSS----SSMSRHDPELLRADLM 208

  Fly   682 VEFEGETGLDYGGLAREWFYLLSKEM-------------FNPYYGLFEYSAMDNYTLQINNGSGL 733
                         ||||..:.|.:|:             .|..|.:.|         :||.....
  Fly   209 -------------LARERVHQLKQELTHITNDISYTERGMNTLYSVGE---------KINARENG 251

  Fly   734 CNEEHLSYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEYYNSLMWIK-- 796
            |.:              :|..|.       ||   :.||:....|...|.|..|...||:.||  
  Fly   252 CYD--------------IAEVHA-------IR---EEMLKVHKSLVSGEKVREELMRSLVQIKNE 292

  Fly   797 --------ENDPRILELTFCLDE-------DVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEW 846
                    ||.    :|....|.       |:.|  |..|...|||......:.|.:|    .||
  Fly   293 LGRQQISEENS----DLASPFDRVCVASQTDLCG--SSGENLNGGARFAEMAKTKWQY----AEW 347

  Fly   847 R-FVARVKEQMSSFLDGFGSIIPLNLIKIFDE----HELELLMCGIQNIDVKDWRENTLYKGDYH 906
            | .:.::::|::..::   .|.|..|....|.    .|.|.|:..:.:|.:|...|..       
  Fly   348 RKHIKKLQQQLADHVE---RIEPGQLESDKDRILLIQEKEKLLNDLNSISLKSRSEEE------- 402

  Fly   907 MNHIIIQWFWRAVLSFSNEMRSRLLQFVTGTSRVPMNGFKELYGSNGPQMFTIEKWGTPNNFPRA 971
                      :.|:   ::.|.:|.:           ..||.|.:|                   
  Fly   403 ----------KRVI---HQTRHKLEE-----------DLKEAYEAN------------------- 424

  Fly   972 HTCF-NRLDLPPYEGYLQLKDKLIKAIEGSQ 1001
            :||. |||..  :|....|.|||.:|::.::
  Fly   425 NTCVANRLRF--HEEKQLLLDKLQEALKSTK 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999
WW 248..277 CDD:278809
WW 531..560 CDD:278809 11/28 (39%)
WW 581..613 CDD:197736 14/31 (45%)
HECTc 650..1003 CDD:238033 80/390 (21%)
HECTc 674..1003 CDD:214523 75/366 (20%)
kibraNP_001034055.1 WW 57..87 CDD:238122 12/29 (41%)
WW 103..132 CDD:278809 12/28 (43%)
C2_Kibra 693..813 CDD:176062
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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