DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nedd4 and Magi

DIOPT Version :9

Sequence 1:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster
Sequence 2:NP_001286661.1 Gene:Magi / 37403 FlyBaseID:FBgn0034590 Length:1202 Species:Drosophila melanogaster


Alignment Length:552 Identity:109/552 - (19%)
Similarity:185/552 - (33%) Gaps:172/552 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 HAFIRETREQSEPSSGNSDGEWEHVEATNAGETSAQPHPFPTGGHDALPAGWEERQDANGRTYYV 265
            |.:.::..:|..|.:.:...:..|            |||.|                        
  Fly    53 HFYQQQQPQQLAPLNASHQHQHSH------------PHPHP------------------------ 81

  Fly   266 NHTARTTQWDRPTVLNSHSSQSTDDQLASDFQRRFHISVDDTESGRSADSISHNSIEDNNNAAGL 330
            :..|..|.:   ...|.:|  :.:..||:...|:|:.|.|              :::|..:|..:
  Fly    82 HPVAAATSF---ATFNGNS--NLNSSLANGSSRKFNCSRD--------------NVDDGGDAGEM 127

  Fly   331 AYTPKTAATSSAPPNTPTNNNGILAQIAMQYRAEEDQDPTVDHTSFVYNSLRHPVAHRQPEISAT 395
            |...:|  .|||..:...|.:|             ..:.||.........|..|..|.       
  Fly   128 AAASQT--LSSAGTDVVGNGSG-------------HGNGTVTGNGEKSGGLAPPGGHH------- 170

  Fly   396 SLQNDLRPVREAPGVPDI------AITNPFTRRAAGNMAGGAGWQQERRRQQMQLHIQQHQQRQQ 454
                 |||    |..|.:      .|.|..:|....:::|.:.     ...||.:    |.|...
  Fly   171 -----LRP----PPPPALKKSASAVIGNSASREDVASLSGTSS-----LNSQMSV----HNQFIS 217

  Fly   455 QQQQNRILLDVDH------RQQEPQH--RGQRHQ-QQHRPSNEDTDHTDSHNPSDISAPSTRRNS 510
            ....|.|..:..|      |...|..  :|.:.. .|:...|.:|.  ||...|:......:..:
  Fly   218 GLPSNGIGSNGVHGGAATGRGGPPNSILKGSKENLLQNTYYNGETG--DSSLGSECGVGDVQHQN 280

  Fly   511 EEDNAAVPPMEQNTGGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGRASPMPNQTRRV 575
            .|.:       .:.|....||||:|.......|..:||||.:..:.|:|||..:     .|.:.:
  Fly   281 HESH-------DDPGDGLGPLPPKWETAYTERGELYFIDHNTGTSHWLDPRLSK-----YQKKSL 333

  Fly   576 EDDL-GPLPEGWEERVHTDGRVFYIDHNTRTTQWEDPRLSNPNIAGQAVPYSRDYKQKYEYFKSH 639
            ||.. ..||.|||:...:...:::|||..|.||:|:|.|.....|.:.....:..:|:.:..:..
  Fly   334 EDCCEDELPYGWEKIEDSMYGMYFIDHVNRRTQYENPVLEAKRRAAEQSQQQQQMQQQQQQMQEQ 398

  Fly   640 IRK------------------------PTNVPNKF-----EIRIRR--TSILEDS----YRIISS 669
            ..|                        |..:|.||     |::.:|  |::|:.|    :.|:.|
  Fly   399 RSKTPTALSETMPTEAAEAHEQEEDESPMKLPYKFTRNPAELQGQRINTTLLKSSRGLGFTIVGS 463

  Fly   670 ------------VTKTDLLKTKLWVEFEGETG 689
                        ..||.:.....|::.:.:||
  Fly   464 DGSAGGDVEEFLQIKTVVPNGPAWLDGQLQTG 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999 1/2 (50%)
WW 248..277 CDD:278809 2/28 (7%)
WW 531..560 CDD:278809 10/28 (36%)
WW 581..613 CDD:197736 13/31 (42%)
HECTc 650..1003 CDD:238033 13/63 (21%)
HECTc 674..1003 CDD:214523 3/16 (19%)
MagiNP_001286661.1 WW 294..323 CDD:278809 10/28 (36%)
WW 342..372 CDD:238122 12/29 (41%)
PDZ 443..534 CDD:214570 11/53 (21%)
DegQ <455..534 CDD:223343 7/41 (17%)
PDZ_signaling 606..668 CDD:238492
PDZ 925..1011 CDD:214570
PDZ_signaling 1029..1110 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.