DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nedd4 and Smurf2

DIOPT Version :10

Sequence 1:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster
Sequence 2:NP_001100531.1 Gene:Smurf2 / 303614 RGDID:1310067 Length:748 Species:Rattus norvegicus


Alignment Length:984 Identity:314/984 - (31%)
Similarity:429/984 - (43%) Gaps:302/984 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 LRIVVLTGQSLAKKDIFGASDPYVRIDLNTINGDINIDSVLTKTKKKTLNPTWNEEFIFRVKPSE 136
            ||:.||..::|.|||.|...||:.::   .::|.....|  |.|.|.||:|.||:.:...:..|:
  Rat    14 LRLTVLCAKNLVKKDFFRLPDPFAKV---VVDGSGQCHS--TDTVKNTLDPKWNQHYDLYIGKSD 73

  Fly   137 HKLVFQVFDENRLTRDD---FLGMV----------------ELTLVNLPTEQEGRTIGEQSYTLR 182
             .:...|::..::.:..   |||.|                .|.|..|.........|:...:|:
  Rat    74 -SVTISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKLGPNDNDTVRGQIVVSLQ 137

  Fly   183 PRRSVGAKSRIKGTLRIYHAFIRETREQSEPSSGNSDGEWEHVEATNAGETSAQPHPFPTGGHDA 247
            .|..:|...::....|::                  |.:                          
  Rat   138 SRDRIGTGGQVVDCSRLF------------------DND-------------------------- 158

  Fly   248 LPAGWEERQDANGRTYYVNHTARTTQWDRPTVLNSHSSQSTDDQLASDFQRRFHISVDDTESGRS 312
            ||.|||||:.|:||..|:||..|||||:|||                                |.
  Rat   159 LPDGWEERRTASGRIQYLNHITRTTQWERPT--------------------------------RP 191

  Fly   313 ADSISHNSIEDNNNAAGLAYTPKTAATSSAPPNTP-TNNNGILAQIAMQYRAEEDQDPTVDHTSF 376
            |...|               :|....:.....||| |..||                        
  Rat   192 ASEYS---------------SPGRPLSCFVDENTPITGTNG------------------------ 217

  Fly   377 VYNSLRHPVAHRQPEISATSLQNDLRPVREAPGVPDIAITNPFTRRAAGNMAGGAGWQQERRRQQ 441
                             ||..|:.                                         
  Rat   218 -----------------ATCGQSS----------------------------------------- 224

  Fly   442 MQLHIQQHQQRQQQQQQNRILLDVDHRQQEPQHRGQRHQQQHRPSNEDTDHTDSHNPSDISAPST 506
                                    |.|..|.:.|.|||:..       ...|..|.|.|      
  Rat   225 ------------------------DPRLAERRVRSQRHRNY-------MSRTHLHTPPD------ 252

  Fly   507 RRNSEEDNAAVPPMEQNTGGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGRASPMPNQ 571
                                    ||..:..:....|:.:|:...:..:||.|||      :|..
  Rat   253 ------------------------LPEGYEQRTTQQGQVYFLHTQTGVSTWHDPR------VPRD 287

  Fly   572 TRRVE-DDLGPLPEGWEERVHTDGRVFYIDHNTRTTQWEDPRLS---------NPNIAGQ----- 621
            ...:. ::|||||.|||.|....|||:::|||.||||:.|||||         ...:..|     
  Rat   288 LSNINCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNRQNQLKDQQQQQV 352

  Fly   622 -----------AVP-YSRDYKQKYEYFKSHIRKPTNVPNKFEIRIRRTSILEDSYRIISSVTKTD 674
                       .|| |.||..||.:..:..:.:.........|.:.|..|.|:|||.:..:...|
  Rat   353 VSLCPDDTECLTVPRYKRDLVQKLKILRQELSQQQPQAGHCRIEVSREEIFEESYRQVMKMRPKD 417

  Fly   675 LLKTKLWVEFEGETGLDYGGLAREWFYLLSKEMFNPYYGLFEYSAMDNYTLQINNGSGLCNEEHL 739
            |.| :|.::|.||.||||||:||||.||||.||.|||||||:||..|.||||||..|.: |.|||
  Rat   418 LWK-RLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAV-NPEHL 480

  Fly   740 SYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEYYNSLMWIKEND-PRIL 803
            |||.|:|||.||||:||..:|..|..||||.:|.|.|.|.|||.||.:.:|||:||.||| ..:|
  Rat   481 SYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKSITLDDMELVDPDLHNSLVWILENDITGVL 545

  Fly   804 ELTFCLDEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVARVKEQMSSFLDGFGSIIP 868
            :.|||::.:.:|:..||||||.|.:|.||.|||.||::|.:.|||:..::.|..:...||..:||
  Rat   546 DHTFCVEHNAYGEIIQHELKPNGKSIPVTEENKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIP 610

  Fly   869 LNLIKIFDEHELELLMCGIQNIDVKDWRENTLYKGDYHM--NHIIIQWFWRAVLSFSNEMRSRLL 931
            .:|:|.|||.||||::||:..|||.||:.||..|   |.  :..:::|||:||..|..|.|:|||
  Rat   611 QHLLKTFDEKELELIICGLGKIDVSDWKANTRLK---HCTPDSNVVKWFWKAVELFDEERRARLL 672

  Fly   932 QFVTGTSRVPMNGFKELYGSNGPQMFTIEKW-GTPNNFPRAHTCFNRLDLPPYEGYLQLKDKLIK 995
            |||||:||||:.|||.|.|:.||::|||.:. ...||.|:|||||||:|:||||.|.:|.:||:.
  Rat   673 QFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDACTNNLPKAHTCFNRIDIPPYESYEKLYEKLLT 737

  Fly   996 AIEGSQGFA 1004
            |||.:.|||
  Rat   738 AIEETCGFA 746

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999 35/150 (23%)
WW 248..277 CDD:459800 18/28 (64%)
HUL4 <523..1003 CDD:227354 230/510 (45%)
Smurf2NP_001100531.1 C2_Smurf-like 13..137 CDD:176028 31/128 (24%)
PRP40 155..>236 CDD:227435 39/277 (14%)
WW 159..188 CDD:459800 18/28 (64%)
WW 252..283 CDD:197736 8/60 (13%)
WW 298..330 CDD:197736 19/31 (61%)
HECTc 393..745 CDD:238033 188/356 (53%)

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