DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nedd4 and Ube3a

DIOPT Version :9

Sequence 1:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster
Sequence 2:NP_001380595.1 Gene:Ube3a / 22215 MGIID:105098 Length:870 Species:Mus musculus


Alignment Length:962 Identity:220/962 - (22%)
Similarity:371/962 - (38%) Gaps:233/962 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 GRTIGEQSYTLRPRRSVGAKSRIKGTLRIYHAFIRE------TRE--QSEPSSGNSDGEWEHVEA 227
            |.:..|.....|.:|: .||..|:   |.||.....      |.|  .|.|:....|.....::|
Mouse    10 GESQSEDIEASRMKRA-AAKHLIE---RYYHQLTEGCGNEACTNEFCASCPTFLRMDNNAAAIKA 70

  Fly   228 TNAGETSAQ---PHPFPTGGHDA-------------LPAGWEERQD-------ANGRTYYVNHTA 269
            ....:.:|:   |||...|...|             :....:|.:|       ...:.|.:....
Mouse    71 LELYKINAKLCDPHPSKKGASSAYLENSKGASNNSEIKMNKKEGKDFKDVIYLTEEKVYEIYEFC 135

  Fly   270 RTTQWDRPTVLNSHSSQSTDDQLASDFQRRFHISVDDTESGRSADSISHNSIEDNNNAAGLAYTP 334
            |.::...|.:.......|:.:.|...|::....:.::.:|.:..|.......::....:..|...
Mouse   136 RESEDYSPLIRVIGRIFSSAEALVLSFRKVKQHTKEELKSLQEKDEDKDEDEKEKAACSAAAMEE 200

  Fly   335 KTAATSSAPPNTPTNNNGILAQIAMQYRAEEDQDPTVDHTSFVYNSLRHPVAHRQPEISATSLQN 399
            .:.|:||...::...:|.:      |....:|....:|....||:||   :|:.:.|   |:..|
Mouse   201 DSEASSSRMGDSSQGDNNV------QKLGPDDVTVDIDAIRRVYSSL---LANEKLE---TAFLN 253

  Fly   400 DLRPVREAPGVP-DIAITNPFTR---------------------------------------RAA 424
            .|  |..:|.|. |:...|.:||                                       .|.
Mouse   254 AL--VYLSPNVECDLTYHNVYTRDPNYLNLFIIVMENSNLHSPEYLEMALPLFCKAMCKLPLEAQ 316

  Fly   425 GNMAG-GAGWQQERRRQQMQLHIQ---------QHQQRQQQQQQNRIL----------------- 462
            |.:.. .:.:..::.|:.|:...|         :...|......:.|:                 
Mouse   317 GKLIRLWSKYSADQIRRMMETFQQLITYKVISNEFNSRNLVNDDDAIVAASKCLKMVYYANVVGG 381

  Fly   463 -LDVDHRQQEPQHRGQRHQQQHRPSNEDTDHTDSHNPSDISAPSTRRNSEEDNAAVPPMEQNTGG 526
             :|.:|.:::.:          .|..|.::.|......|     .|||.:  ...|.|:|...|.
Mouse   382 DVDTNHNEEDDE----------EPIPESSELTLQELLGD-----ERRNKK--GPRVDPLETELGV 429

  Fly   527 E---------------EEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGRASPMPNQTRRVE 576
            :               .|||.....|.   ...|||......:.:::        ..|.....|.
Mouse   430 KTLDCRKPLISFEEFINEPLNDVLEMD---KDYTFFKVETENKFSFM--------TCPFILNAVT 483

  Fly   577 DDLGPLPEGWEERVHTDGRVFYIDHNTRTTQWEDPRLS--NPNIAGQAV-PYSRDYKQKYEYFKS 638
            .:||                .|.|:..|  .:.:.|::  ...:.||.: ||.|           
Mouse   484 KNLG----------------LYYDNRIR--MYSERRITVLYSLVQGQQLNPYLR----------- 519

  Fly   639 HIRKPTNVPNKFEIRIRRTSILEDS---YRIISSVTKTDLLKTKLWVEFEGETGLDYGGLAREWF 700
                         :::||..|::|:   ..:|:.....| ||.:|:||||||.|:|.||:::|:|
Mouse   520 -------------LKVRRDHIIDDALVRLEMIAMENPAD-LKKQLYVEFEGEQGVDEGGVSKEFF 570

  Fly   701 YLLSKEMFNPYYGLFEYSAMDNYT-LQINNGSGLCNEEHLSYFKFIGRIAGMAVYHGKLLDAFFI 764
            .|:.:|:|||..|:|.|   |..| |...|.|....|   ..|..||.:.|:|:|:..:||..|.
Mouse   571 QLVVEEIFNPDIGMFTY---DEATKLFWFNPSSFETE---GQFTLIGIVLGLAIYNNCILDVHFP 629

  Fly   765 RPFYKMMLQKPIDLKDMESVDTEYYNSLMWIKENDPRI---LELTFCLDE-DVFGQKSQHELKPG 825
            ...|:.::.|....:|:.......|.||..:.|.:..:   :.:||.:.: |:||....::||..
Mouse   630 MVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGSVEDDMMITFQISQTDLFGNPMMYDLKEN 694

  Fly   826 GANIDVTNENKDEYIKLVIEWRFVARVKEQMSSFLDGFGSIIPLNLIK-IFDEHELELLMCGIQN 889
            |..|.:||||:.|::.|..::.....|::|..:|..||..:...:.:| :|...|:|||:||.:|
Mouse   695 GDKIPITNENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRN 759

  Fly   890 IDVKDWRENTLYKGDYHMNHIIIQWFWRAVLSFSNEMRSRLLQFVTGTSRVPMNG---FKELYGS 951
            :|.:...|.|.|.|.|....::|:.||..|.||::|.:...|||.|||.|.|:.|   .|.:...
Mouse   760 LDFQALEETTEYDGGYTRESVVIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKLKMIIAK 824

  Fly   952 NGPQMFTIEKWGTPNNFPRAHTCFNRLDLPPYEGYLQLKDKLIKAIEGSQGF 1003
            |||.         ....|.:|||||.|.||.|....:||::|:|||..::||
Mouse   825 NGPD---------TERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKGF 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999 10/32 (31%)
WW 248..277 CDD:278809 4/35 (11%)
WW 531..560 CDD:278809 5/28 (18%)
WW 581..613 CDD:197736 3/31 (10%)
HECTc 650..1003 CDD:238033 122/364 (34%)
HECTc 674..1003 CDD:214523 117/337 (35%)
Ube3aNP_001380595.1 AZUL 27..81 CDD:406862 13/56 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..223 8/57 (14%)
HECTc 518..868 CDD:238033 125/390 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.