DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nedd4 and etc-1

DIOPT Version :10

Sequence 1:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster
Sequence 2:NP_495842.1 Gene:etc-1 / 174388 WormBaseID:WBGene00008429 Length:1001 Species:Caenorhabditis elegans


Alignment Length:475 Identity:120/475 - (25%)
Similarity:217/475 - (45%) Gaps:58/475 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   568 MPNQTRRVEDDLGPLPEGWEERVHTDGRVFYIDHNTRTTQWEDPRLSNPNIAGQA---------- 622
            |||...::|..:.      .|.|.....::.:|.::.... ||...:.|.:..:|          
 Worm   543 MPNGRLQIERTMD------TEFVERLAAIYEMDSDSENDD-EDEDNNLPAVLRRAICVMKHIPFI 600

  Fly   623 VPYSRDYK--------QKYEYFKSHIRKPTNVPNKFEIRIRRTSILEDSYRIISSVTKTD----- 674
            ||:....|        .|.:::.|......|.|:   :.:||..:..|::...:...:.|     
 Worm   601 VPFMDRVKLFTRLLNQDKEKHYTSTFGMGFNGPS---VTVRRDQVYMDAFETFAPKMQGDKVNDL 662

  Fly   675 --LLKTKLWVEFEG--ETGLDYGGLAREWFYLLSKEMFNPYYGLFEYSAMDNYTLQIN-NGSGLC 734
              :::.|: |.:.|  |:|:|.||:.||:...|.|..||...|.|.::  ::..|..| ....|.
 Worm   663 KSMVRVKM-VNWAGMNESGIDGGGIFREFLSELLKTAFNVERGFFTFT--ESKLLYPNPTAPFLL 724

  Fly   735 NEEHLSYFKFIGRIAGMAVYHGKLLDA----FFIRPFYKMMLQKPIDLKDMESVDTEYYNSLMWI 795
            ..:.|::|:||||:.|..:|..:|.:.    |||...::....|.:||:.|:|.|...:..|..:
 Worm   725 GVDCLAHFQFIGRMIGKLIYERQLQEVRFAEFFIAQIFETDKNKDVDLQHMKSFDPIIFKHLKAL 789

  Fly   796 KENDPR---ILELTFCLDEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVARVKEQMS 857
            ::.:.|   .|:|.|.:.....|......|||.|:...||.||..||::|.:.:....|:...:.
 Worm   790 QKMNNRELDELQLDFSVVTSDMGLVRNVNLKPNGSKFRVTVENVHEYVRLYVNYHLKQRIASMVD 854

  Fly   858 SFLDGFGSIIPLNLIKIFDEHELELLMCGIQNI----DVKDWRENTLYKGDYHMNHIIIQWFWRA 918
            :...|...||.:..:::|..|||::::.|.:.:    :::.:.|.....|...:|:  .:.||..
 Worm   855 AVRKGISEIISIEWMRMFAPHELQIMIAGYEEVFTAKELRKFCELRFAAGTQDINY--EEMFWDV 917

  Fly   919 VLSFSNEMRSRLLQFVTGTSRVPMNGFKELYGSNGPQMFTIEKWGTPNNFPRAHTCFNRLDLPPY 983
            :...||:.:..||:||||.||.|::|||.:.    |:|..:....:.:..|.:.||.|.|.:|.|
 Worm   918 IDKLSNDDKKALLKFVTGCSRAPVDGFKSIQ----PRMGVLVIPSSDDELPTSATCMNMLRIPKY 978

  Fly   984 EGYLQLKDKLIKAIEGSQGF 1003
            ....:|::||..||....||
 Worm   979 SNRTKLEEKLRYAINSGAGF 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999
WW 248..277 CDD:459800
HUL4 <523..1003 CDD:227354 118/473 (25%)
etc-1NP_495842.1 IQCG-IQCD 19..>47 CDD:483958
HECTc 661..998 CDD:214523 96/345 (28%)
Blue background indicates that the domain is not in the aligned region.

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