DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nedd4 and smurf1

DIOPT Version :10

Sequence 1:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster
Sequence 2:XP_002931540.1 Gene:smurf1 / 100491582 XenbaseID:XB-GENE-479046 Length:731 Species:Xenopus tropicalis


Alignment Length:981 Identity:305/981 - (31%)
Similarity:424/981 - (43%) Gaps:288/981 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SLAAVNDSGDSCHLRIVVLTGQSLAKKDIFGASDPYVRIDLNTINGDINIDSVLTKTKKKTLNPT 123
            |.|.....|.|..:|:.||..::|||:|.|...||:.:|   .::|.....|  |.|.|.||:|.
 Frog     2 SNAVTRRGGSSIRVRLTVLCAKNLAKRDFFRLPDPFAKI---VVDGSGQCHS--TDTVKNTLDPK 61

  Fly   124 WNEEFIFRVKPSEHKLVFQVFDENRLTRDD---FLGMVELTLVNLPTEQEGRTIGEQSYTLRPRR 185
            ||:.:...|...: .:...:::..::.:..   |||.|.| |.|                     
 Frog    62 WNQHYDLYVGKMD-SITISIWNHKKIHKKQGAGFLGCVRL-LSN--------------------- 103

  Fly   186 SVGAKSRIKGTLRIYHAFIRETREQSEPSSGNSDGEWEHVEATNAGETSAQPHPFPTGGHDALPA 250
               |.||:|.|                                               |:..|..
 Frog   104 ---AISRLKDT-----------------------------------------------GYQRLDL 118

  Fly   251 GWEERQDANGRTYYVNHTARTTQWDRPTVLNSHSSQSTDDQLASDFQRRFHISVDDTESGRSADS 315
                                       ..||...|.:...|:....|.|..|       |.....
 Frog   119 ---------------------------CKLNPADSDAVRGQIVVSLQTRDRI-------GTVGSV 149

  Fly   316 ISHNSIEDNNNAAGLAYTPKTAATSSAPPNTPTNNNGILAQIAMQYRAEEDQDPTVDHTSFVYNS 380
            :....:.||:   |..|       ..|.|..|                                 
 Frog   150 VDCRGLLDND---GALY-------EDAGPGRP--------------------------------- 171

  Fly   381 LRHPVAHRQPEISATSLQNDLRPVREAPGVPDIAITNPFTRRAAGNMAGGAGWQQERRRQQMQLH 445
                         .:...::..|..:.||             |||   ||.....|...|:.:|.
 Frog   172 -------------LSCFMDEPAPYTDGPG-------------AAG---GGPCRLVESPGQEQRLQ 207

  Fly   446 IQQHQQRQQQQQQNRILLDVDHRQQEPQHRGQRHQQQHRPSNEDTDHTDSHNPSDISAPSTRRNS 510
            .|                    |.:.|:.|               :|..:               
 Frog   208 AQ--------------------RLRGPEVR---------------EHVQT--------------- 222

  Fly   511 EEDNAAVPPMEQNTGGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGRASPMPNQTRRV 575
                    |:.::.|.:.:.||..:..:....|:.:|:...:..:||.|||      :|.....|
 Frog   223 --------PLNRSHGYQSQDLPEGYEQRTTVQGQVYFLHTQTGVSTWHDPR------IPRDLNSV 273

  Fly   576 E-DDLGPLPEGWEERVHTDGRVFYIDHNTRTTQWEDPR----------LSNPNIA---------- 619
            . |||||||.|||.|....||::::|||.||||:.|||          |..||.|          
 Frog   274 NCDDLGPLPTGWEVRTTVSGRIYFVDHNNRTTQFTDPRLHHIINHQSQLKEPNNAIPVQSDGSLE 338

  Fly   620 -GQAVP---YSRDYKQKYEYFKSHIRKPTNVPNKFEIRIRRTSILEDSYRIISSVTKTDLLKTKL 680
             |...|   |.||..||.:..:..:...........:.:.|..|.|:|||.|..:...| ||.:|
 Frog   339 EGDEFPTQRYERDLVQKLKVLRHELSLLQPQAGHCRVEVSREEIFEESYRQIMKMRPKD-LKKRL 402

  Fly   681 WVEFEGETGLDYGGLAREWFYLLSKEMFNPYYGLFEYSAMDNYTLQINNGSGLCNEEHLSYFKFI 745
            .|:|.||.||||||:||||.|||..||.|||||||:||..:.||||||..|.: |.:|||||.|:
 Frog   403 MVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSI-NPDHLSYFHFV 466

  Fly   746 GRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEYYNSLMWIKEND-PRILELTFCL 809
            |||.|:||:||..::..|..||||.:|.|||.|.|:||||.|.:.||:||.||| ..:|:.|||:
 Frog   467 GRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITSVLDHTFCV 531

  Fly   810 DEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVARVKEQMSSFLDGFGSIIPLNLIKI 874
            :.:.||:..||||||.|.|:.||.|||.||::|.:.|||:..::.|..:...||..:||.:|:|.
 Frog   532 EHNAFGRLLQHELKPNGKNLQVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKP 596

  Fly   875 FDEHELELLMCGIQNIDVKDWRENTLYKGDYH--MNHIIIQWFWRAVLSFSNEMRSRLLQFVTGT 937
            |::.||||::.|:..||:.||:.||..|   |  .|..|:||||:||.||..|.|:||||||||:
 Frog   597 FEQKELELIIGGLDKIDISDWKANTRLK---HCLANSNIVQWFWQAVESFDEERRARLLQFVTGS 658

  Fly   938 SRVPMNGFKELYGSN---GPQMFTIEKW-GTPNNFPRAHTCFNRLDLPPYEGYLQLKDKLIKAIE 998
            :|||:.|||.|.||.   ||::|||... ...:|.|:|||||||:|:||||.|.:|.:||:.|:|
 Frog   659 TRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVE 723

  Fly   999 GSQGFA 1004
            .:.|||
 Frog   724 ETSGFA 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999 34/135 (25%)
WW 248..277 CDD:459800 1/28 (4%)
HUL4 <523..1003 CDD:227354 230/511 (45%)
smurf1XP_002931540.1 C2_Smurf-like 14..138 CDD:176028 40/228 (18%)
WW 234..266 CDD:197736 9/37 (24%)
WW 280..312 CDD:197736 18/31 (58%)
HECTc 373..728 CDD:238033 184/359 (51%)

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