DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nedd4 and wwp2

DIOPT Version :9

Sequence 1:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster
Sequence 2:NP_001090841.1 Gene:wwp2 / 100038252 XenbaseID:XB-GENE-961516 Length:729 Species:Xenopus tropicalis


Alignment Length:593 Identity:253/593 - (42%)
Similarity:345/593 - (58%) Gaps:81/593 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   487 NEDTDHTDSHNPSDIS-----APSTRRNSEEDNAAVPPMEQNTGGE--EEPLPPRWSMQVAPNGR 544
            :||.:.|.|..||.::     .|......|..|..|..::.||...  |.|||..|..:|...||
 Frog   139 SEDNEDTQSLQPSALTPTSEGLPPGWEQRELSNGRVYYVDHNTKSTTWERPLPLGWEKRVDNRGR 203

  Fly   545 TFFIDHASRRTTWIDP--------------RNGRASPMPNQTRRV----------EDDLGPLPEG 585
            .:::||.:|.|||..|              ||.....|...::|.          .|.|||||.|
 Frog   204 FYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQMQGAMQQLSQRFLYQPSSAAPDNDPLGPLPNG 268

  Fly   586 WEERVHTDGRVFYIDHNTRTTQWEDPR----LSNPNI---------------------------- 618
            ||:| ..:|||:|::||||||||||||    :..|.:                            
 Frog   269 WEKR-QDNGRVYYVNHNTRTTQWEDPRTQGMIQEPALPPGWEMKYTSEGIRYFVDHNKRATTFKD 332

  Fly   619 -----------AGQAVPYSRDYKQKYEYFKSHIRKPTNVPNKFEIRIRRTSILEDSYRIISSVTK 672
                       .|....|.|.::.||..|: .:.....:|:..:|.:.|.::.|||::.|.::..
 Frog   333 PRPGFDSGVKQGGSPGAYDRSFRWKYHQFR-FLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKP 396

  Fly   673 TDLLKTKLWVEFEGETGLDYGGLAREWFYLLSKEMFNPYYGLFEYSAMDNYTLQINNGSGLCNEE 737
            .| |:.:|::...||.||||||:|||||:|||.|:.||.|.||||:..:||.||||..|.: |.:
 Frog   397 YD-LRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSI-NPD 459

  Fly   738 HLSYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEYYNSLMWIKEN--DP 800
            ||:||:||||...||:||||.:|..|..||||.||.|...|:|:||:|.|:|||:||||:|  :.
 Frog   460 HLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKKPTLRDLESIDPEFYNSIMWIKDNNLEE 524

  Fly   801 RILELTFCLDEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVARVKEQMSSFLDGFGS 865
            ..|||.|..|.::.|:.:.|:||.||.||.||.|||:|:|.|:.:|||...|:||.::|||||..
 Frog   525 CELELYFVQDMEILGEVTSHKLKEGGENIRVTEENKEEFISLLTDWRFTRGVEEQTNAFLDGFKE 589

  Fly   866 IIPLNLIKIFDEHELELLMCGIQNIDVKDWRENTLYKGDYHMNHIIIQWFWRAVLSFSNEMRSRL 930
            ::||..::.|||.||||::||:|.||:.||::||:|: .|..|...:||||:.|....||.|.||
 Frog   590 VVPLEWLRYFDEKELELMLCGMQEIDIADWQKNTIYR-HYTKNSKQVQWFWQVVKEMDNEKRIRL 653

  Fly   931 LQFVTGTSRVPMNGFKELYGSNGPQMFTIEKWGTPNNFPRAHTCFNRLDLPPYEGYLQLKDKLIK 995
            |||||||.|:|:.||.||.||||||.|.|::.|.....||:||||||||||||:.|.|||:||:.
 Frog   654 LQFVTGTCRLPVGGFVELIGSNGPQKFCIDRVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLF 718

  Fly   996 AIEGSQGF 1003
            |||.::||
 Frog   719 AIEETEGF 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999
WW 248..277 CDD:278809
WW 531..560 CDD:278809 12/28 (43%)
WW 581..613 CDD:197736 23/35 (66%)
HECTc 650..1003 CDD:238033 186/354 (53%)
HECTc 674..1003 CDD:214523 180/330 (55%)
wwp2NP_001090841.1 WW 160..189 CDD:366073 7/28 (25%)
WW 190..219 CDD:366073 12/28 (43%)
WW 265..293 CDD:366073 19/28 (68%)
WW 305..335 CDD:238122 0/29 (0%)
HECTc 375..727 CDD:238033 188/355 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2273
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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