DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edc3 and PPOX

DIOPT Version :10

Sequence 1:NP_648992.1 Gene:Edc3 / 39957 FlyBaseID:FBgn0036735 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_568717.2 Gene:PPOX / 835061 AraportID:AT5G49970 Length:530 Species:Arabidopsis thaliana


Alignment Length:220 Identity:44/220 - (20%)
Similarity:84/220 - (38%) Gaps:31/220 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LDGHTAPPPVVNKPTPVKLPHFSNI-----LGKQQQLQLQQQQQQLQLQQQQKQQFQEQEREQDL 134
            |.|...||.|..| ..::||.:...     :||..::.:...:     ......:..|::.|.| 
plant   280 LGGRFVPPSVAEK-YKLELPSYPGTSMCVRIGKPPKVDISAMR-----VNYVSPELLEEQVETD- 337

  Fly   135 PSTPRSRANDNGRVAAG--GASSSSGPRGNFNSALSDKMHQLKLIETNGSNGTLRTPQTSRASSA 197
             .|.:.|...:..||||  ..::.:....|.:...|.:|..||..:.||.  ...|...|:..| 
plant   338 -PTVQFRKWFDEAVAAGLRETNAMALSTANKDKKPSSRMVLLKGFDENGF--VWFTNYESKKGS- 398

  Fly   198 QQQPQISTTPNSVAAFFGNMIPPKVEVK--LGSYVSNTRESYCSSSGDSGEATGLSLGS--SKPI 258
                .:|..|::...|:..::..:|.::  :.....:..|:|..|     ...|..:|:  ||..
plant   399 ----DLSENPSAALLFYWEILNRQVRIEGPVERIPESESENYFHS-----RPRGSQIGAIVSKQS 454

  Fly   259 DIVSNGDGFYKQTAASSYGNTNGNV 283
            .:|......|.:....:...::|:|
plant   455 SVVPGRHVLYDEYEELTKQYSDGSV 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edc3NP_648992.1 LSm16_N 5..69 CDD:212484
FDF 343..>397 CDD:430668
YjeF_N 453..583 CDD:444831
PPOXNP_568717.2 PLN02918 4..530 CDD:215496 44/220 (20%)
Blue background indicates that the domain is not in the aligned region.

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