DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edc3 and yjefn3

DIOPT Version :9

Sequence 1:NP_648992.1 Gene:Edc3 / 39957 FlyBaseID:FBgn0036735 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_001038308.1 Gene:yjefn3 / 557840 ZFINID:ZDB-GENE-050208-755 Length:246 Species:Danio rerio


Alignment Length:115 Identity:23/115 - (20%)
Similarity:41/115 - (35%) Gaps:27/115 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PTDQDWIGCAVSIACDEVLG----------VFQGLIKQISAEEITIV-----------RAFRNGV 46
            ||:...:..|.::..|.:||          .:.|::..:...:|.||           ...::|:
Zfish   129 PTEVQLLNDAYNLVIDAILGPETDHKDVKEPYAGMLVTLKQVKIPIVSVDVPSGWDADEPAKDGI 193

  Fly    47 PLRKQNAEVVLKCTDIRSIDLIEPAKQDLDGHTAPPPVVNKPTPVKLPHF 96
                 |.||::..|..:........|..|.|...|.. :.|...:.||.|
Zfish   194 -----NPEVLISLTAPKKCATGFSGKHFLAGRFLPYD-IQKKYELNLPEF 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edc3NP_648992.1 LSm16_N 5..69 CDD:212484 13/84 (15%)
FDF 343..>397 CDD:286601
YjeF_N 453..583 CDD:294225
yjefn3NP_001038308.1 YjeF_N 16..246 CDD:412305 23/115 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0062
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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