DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edc3 and naxe

DIOPT Version :9

Sequence 1:NP_648992.1 Gene:Edc3 / 39957 FlyBaseID:FBgn0036735 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_001002618.1 Gene:naxe / 436891 ZFINID:ZDB-GENE-040718-362 Length:283 Species:Danio rerio


Alignment Length:240 Identity:55/240 - (22%)
Similarity:73/240 - (30%) Gaps:72/240 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DEVLGVFQGLIKQI-SAEEITIVRAFRNGVP---LRKQNAEVVLKCTDIRSIDLIEPAKQDLDGH 78
            :|:...|...:.|: ....::...|...|.|   |.|..|.|::.|         .|.....||.
Zfish    66 EELFSDFSFSVDQLMELAGLSCATAVAKGYPVTSLLKSPARVLVIC---------GPGNNGGDGL 121

  Fly    79 TA---------PPPVVNKPTPVKLPHFSNILGKQ--QQLQLQQQQQQLQLQQQQKQQFQEQEREQ 132
            ..         .|.|:....|          .||  |.|.:|.|:.::        .|..:..|.
Zfish   122 VCARHLKLFGYEPSVLYPKRP----------NKQLFQNLSIQCQKMEI--------PFLTEMPEA 168

  Fly   133 DLPSTPRSRANDNGRVAAGGASSSSGPRGNFNSALSDKMHQLKLIET--------NGSNGTLRTP 189
            ||.....|...|    |..|.|.....|..|...||    |||.|..        :|.:.....|
Zfish   169 DLIDEAYSLVVD----AIFGFSFKGAVREPFGEILS----QLKKITVPIASVDIPSGWDVEKGCP 225

  Fly   190 QTSRASSAQQQPQIS-TTPNSVAAFF--------GNMIPPKVEVK 225
                 ...|....|| |.|...||.|        |..:||.:|.|
Zfish   226 -----DGIQPDMLISLTAPKKSAALFKGRFHFLGGRFVPPVLEQK 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edc3NP_648992.1 LSm16_N 5..69 CDD:212484 11/54 (20%)
FDF 343..>397 CDD:286601
YjeF_N 453..583 CDD:294225
naxeNP_001002618.1 YjeF_N 48..282 CDD:294225 55/240 (23%)
NAD(P)HX. /evidence=ECO:0000255|HAMAP-Rule:MF_03159 115..119 0/3 (0%)
NAD(P)HX. /evidence=ECO:0000255|HAMAP-Rule:MF_03159 184..190 2/5 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0062
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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