DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edc3 and Naxe

DIOPT Version :10

Sequence 1:NP_648992.1 Gene:Edc3 / 39957 FlyBaseID:FBgn0036735 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_001386156.1 Gene:Naxe / 295229 RGDID:1304699 Length:282 Species:Rattus norvegicus


Alignment Length:91 Identity:23/91 - (25%)
Similarity:41/91 - (45%) Gaps:11/91 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 NTANLSDAIRKWLSVNRASVLAIDPPPCGINEVAIKYSILPILPLNGISTATTSSSSSAAATPTP 622
            ::..::.|..|:||...|.  |:|...  .||  .::|:..::.|.|:|.||    :.|.|.| |
  Rat    42 SSETMASAAVKYLSQEEAQ--AVDEEL--FNE--YQFSVDQLMELAGLSCAT----AIAKAYP-P 95

  Fly   623 IASTSAAASATKSAASTNNCGKLYLC 648
            .:.:.:..:........||.|...:|
  Rat    96 TSMSKSPPTVLVICGPGNNGGDGLVC 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edc3NP_648992.1 LSm16_N 5..69 CDD:212484
FDF 343..>397 CDD:430668
YjeF_N 453..583 CDD:444831 7/24 (29%)
NaxeNP_001386156.1 PLN03049 50..>281 CDD:215550 22/83 (27%)
Blue background indicates that the domain is not in the aligned region.

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