Sequence 1: | NP_648990.1 | Gene: | U4-U6-60K / 39955 | FlyBaseID: | FBgn0036733 | Length: | 553 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001324961.1 | Gene: | LIS / 818748 | AraportID: | AT2G41500 | Length: | 554 | Species: | Arabidopsis thaliana |
Alignment Length: | 490 | Identity: | 189/490 - (38%) |
---|---|---|---|
Similarity: | 278/490 - (56%) | Gaps: | 36/490 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 85 APPPT------------AATLANKIDDDYFDLEME----MERDKVALLEEFERKKRARQINVSTD 133
Fly 134 DTEIKSNLRQLNEPICYFGEGPAERRRRLKELLAGLGENA-INKRQYEDEERKQQQREQD----Q 193
Fly 194 ATWYHEGPDSLRIARLWLADYSLPRAKDRLVRAREALEVPSAARAGRMVEMQKKLQSLAPLCSQV 258
Fly 259 GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQT---LRGHASYVGGVALRPGVKADEE 320
Fly 321 NVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQK 385
Fly 386 TEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGF 450
Fly 451 HIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPL 515
Fly 516 KTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWS 550 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
U4-U6-60K | NP_648990.1 | SFM | 132..>166 | CDD:128776 | 16/33 (48%) |
WD40 repeat | 264..301 | CDD:293791 | 14/39 (36%) | ||
WD40 | <286..553 | CDD:225201 | 119/268 (44%) | ||
WD40 | 286..550 | CDD:238121 | 118/266 (44%) | ||
WD40 repeat | 357..393 | CDD:293791 | 19/35 (54%) | ||
WD40 repeat | 398..434 | CDD:293791 | 16/35 (46%) | ||
WD40 repeat | 441..476 | CDD:293791 | 20/34 (59%) | ||
WD40 repeat | 482..519 | CDD:293791 | 15/36 (42%) | ||
WD40 repeat | 525..551 | CDD:293791 | 15/26 (58%) | ||
LIS | NP_001324961.1 | SFM | 121..166 | CDD:128776 | 19/44 (43%) |
WD40 | 257..535 | CDD:238121 | 126/288 (44%) | ||
WD40 repeat | 258..296 | CDD:293791 | 14/39 (36%) | ||
WD40 repeat | 302..337 | CDD:293791 | 8/42 (19%) | ||
WD40 repeat | 342..378 | CDD:293791 | 18/35 (51%) | ||
WD40 repeat | 385..420 | CDD:293791 | 15/34 (44%) | ||
WD40 repeat | 426..460 | CDD:293791 | 20/33 (61%) | ||
WD40 repeat | 468..505 | CDD:293791 | 15/36 (42%) | ||
WD40 repeat | 511..535 | CDD:293791 | 13/23 (57%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0272 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H3446 | |
Inparanoid | 1 | 1.050 | 331 | 1.000 | Inparanoid score | I677 |
OMA | 1 | 1.010 | - | - | QHG54420 | |
OrthoDB | 1 | 1.010 | - | - | D1076587at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004342 | |
OrthoInspector | 1 | 1.000 | - | - | oto3714 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102752 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR19846 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3609 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.840 |