| Sequence 1: | NP_648990.1 | Gene: | U4-U6-60K / 39955 | FlyBaseID: | FBgn0036733 | Length: | 553 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001100129.1 | Gene: | Prpf4 / 298095 | RGDID: | 1311303 | Length: | 521 | Species: | Rattus norvegicus |
| Alignment Length: | 548 | Identity: | 276/548 - (50%) |
|---|---|---|---|
| Similarity: | 366/548 - (66%) | Gaps: | 48/548 - (8%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4 DDDIQYIKRQRTLHYGSLEESERKRQNAAASGAAATTTSGTTASSGAGTTTTGTGGQLEDIDSDE 68
Fly 69 DYEESTKKTSNAKQAGAPPPTAATLANKIDDDYFDLEMEMERDKVALLEEFERKKRARQINVSTD 133
Fly 134 DTEIKSNLRQLNEPICYFGEGPAERRRRLKELLAGLGENAINKRQYEDEERKQQQREQDQATWYH 198
Fly 199 EGPDSLRIARLWLADYSLPRAKDRLVRAREALEVPSAARAGRMVEMQKKLQSLAPLCSQVGDTRP 263
Fly 264 VSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRP--GVKADEENVVAMA 326
Fly 327 SGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQ 391
Fly 392 EGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGS 456
Fly 457 QDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGH 521
Fly 522 DNKVISVDIAPNSQYIATTSFDRTFKLW 549 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| U4-U6-60K | NP_648990.1 | SFM | 132..>166 | CDD:128776 | 22/33 (67%) |
| WD40 repeat | 264..301 | CDD:293791 | 22/36 (61%) | ||
| WD40 | <286..553 | CDD:225201 | 161/266 (61%) | ||
| WD40 | 286..550 | CDD:238121 | 161/266 (61%) | ||
| WD40 repeat | 357..393 | CDD:293791 | 24/35 (69%) | ||
| WD40 repeat | 398..434 | CDD:293791 | 26/35 (74%) | ||
| WD40 repeat | 441..476 | CDD:293791 | 25/34 (74%) | ||
| WD40 repeat | 482..519 | CDD:293791 | 17/36 (47%) | ||
| WD40 repeat | 525..551 | CDD:293791 | 15/25 (60%) | ||
| Prpf4 | NP_001100129.1 | SFM | 102..140 | CDD:128776 | 23/37 (62%) |
| WD40 | <227..518 | CDD:225201 | 174/292 (60%) | ||
| WD40 | 232..518 | CDD:238121 | 171/287 (60%) | ||
| WD40 repeat | 233..270 | CDD:293791 | 22/36 (61%) | ||
| WD40 repeat | 284..320 | CDD:293791 | 15/36 (42%) | ||
| WD40 repeat | 325..361 | CDD:293791 | 24/35 (69%) | ||
| WD40 repeat | 368..403 | CDD:293791 | 25/34 (74%) | ||
| WD40 repeat | 409..443 | CDD:293791 | 23/33 (70%) | ||
| WD40 repeat | 451..488 | CDD:293791 | 17/36 (47%) | ||
| WD40 repeat | 494..518 | CDD:293791 | 13/23 (57%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166340372 | |
| Domainoid | 1 | 1.000 | 101 | 1.000 | Domainoid score | I6819 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0272 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H3446 | |
| Inparanoid | 1 | 1.050 | 549 | 1.000 | Inparanoid score | I1099 |
| OMA | 1 | 1.010 | - | - | QHG54420 | |
| OrthoDB | 1 | 1.010 | - | - | D1076587at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0004342 | |
| OrthoInspector | 1 | 1.000 | - | - | oto97595 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102752 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR19846 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X3609 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 15 | 14.770 | |||||