DRSC/TRiP Functional Genomics Resources

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Protein Alignment qjt and nsmce2

DIOPT Version :10

Sequence 1:NP_648987.1 Gene:qjt / 39952 FlyBaseID:FBgn0036730 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_001122190.1 Gene:nsmce2 / 564644 ZFINID:ZDB-GENE-081022-128 Length:230 Species:Danio rerio


Alignment Length:232 Identity:59/232 - (25%)
Similarity:104/232 - (44%) Gaps:40/232 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SALSTLVENKKFFKEMSDFVSDFSDGG-------------KIKKLLEQSVEQS--------VEHA 52
            |..|||...|....::.|::...||.|             .:|||.|..:|.|        :..:
Zfish     5 SVNSTLSNLKSCQADVGDYMDMVSDVGLGIVEAQGMENSPSLKKLGEMIMECSRLDSEINCLVES 69

  Fly    53 VNVVHMKIKHQSLNKAMNQVKNSSATIEEFEEVWKERSKAVEQKRINVKNLHEFKNFVKAVESAA 117
            ||.:..:::| :..:||..::.|  ..:.|.|:....|.:      :::|..:...|.:.|...|
Zfish    70 VNEMTAQVRH-APPEAMVNLRGS--VKDRFTELIAGVSDS------DLRNHSKVVAFKETVRKYA 125

  Fly   118 GQAGAEVNDQANGTAYDEDLIMEDSGSEVFSFYDPWSKALIKNPMRNKMCGHIYDRDSVMPII-- 180
            .||.....::..  ..|||:.:..|.:   :|..|.::..:.|||:||.|.|.||:::|:.:|  
Zfish   126 MQAQNPAENEEE--ELDEDIAVTQSQT---NFICPLTQVEMVNPMKNKKCNHYYDQEAVLEMIKN 185

  Fly   181 --MDRIGIRCPVLGCANLCYIQPDHLVQDANVQQKIQ 215
              .:|...|||.:||.| ..:|...|..|..:::.||
Zfish   186 KHKNRKKFRCPKVGCGN-ADVQESDLELDLIMKRMIQ 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qjtNP_648987.1 SPL-RING_NSE2 152..216 CDD:438313 24/68 (35%)
nsmce2NP_001122190.1 SPL-RING_NSE2 152..222 CDD:438313 25/71 (35%)

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