DRSC/TRiP Functional Genomics Resources

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Protein Alignment qjt and nsmce2

DIOPT Version :10

Sequence 1:NP_648987.1 Gene:qjt / 39952 FlyBaseID:FBgn0036730 Length:233 Species:Drosophila melanogaster
Sequence 2:XP_031759369.1 Gene:nsmce2 / 100497178 XenbaseID:XB-GENE-13579717 Length:238 Species:Xenopus tropicalis


Alignment Length:189 Identity:47/189 - (24%)
Similarity:93/189 - (49%) Gaps:36/189 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LEQSVEQSVEHAVNVVHMKIKHQSLNKA---MNQVKNSSATIE--EFEEVWKERSKAVEQKRINV 100
            :|:.:.|.: |||.....|::.:.:.:.   ::||:...|||:  ..:|..|:..:.|       
 Frog    65 MERDLNQYI-HAVEETVQKLRREQIEQVPDLLSQVQEKYATIQGKNTDEDLKKNGRFV------- 121

  Fly   101 KNLHEFKNFVKAVESAAGQAGAEVNDQANGT--AYDEDLIMEDSGSEVFSFYDPWSKALIKNPMR 163
                :||:.::.:....|:     .::..|.  ..|||:.:..|..   :|..|.::..:.||::
 Frog   122 ----QFKDQLREMRKQMGE-----KEEGEGAFENVDEDIAVMPSQQ---NFTCPITQMKMTNPVK 174

  Fly   164 NKMCGHIYDRDSVMPIIMDRIGIR----CPVLGC----ANLCYIQPDHLVQDA-NVQQK 213
            ||:|||.|:::::..||.|:...:    ||::||    ..|..:.||.|::.| :||.|
 Frog   175 NKVCGHTYEKEAIERIIQDKHQRKKRATCPIIGCDHSDMQLSDLGPDTLLKRAIDVQNK 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qjtNP_648987.1 SPL-RING_NSE2 152..216 CDD:438313 24/71 (34%)
nsmce2XP_031759369.1 SPL-RING_NSE2 160..229 CDD:438313 22/68 (32%)

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